Gene Information

Name : sgbE (SNSL254_A3955)
Accession : YP_002042925.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 3836315 - 3837010 bp
Length : 696 bp
Strand : +
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGTTAGAGCAACTGAAAGCCGAGGTGCTGGCGGCCAACCTGGCGCTTCCGGCGCACGGGCTGGTCACCTTTACCTGGGG
CAACGTCAGCGCGGTCGATGAGACGCGCAAACTGATGGTCATCAAGCCTTCCGGCGTTGAATATGAGGTGATGACCGCCG
ACGATATGGTGGTGGTAGAGATCGCCAATGGCAAGGTCGTTGAAGGCAACAAAAAACCGTCGTCCGATACCGCGACCCAT
CTGGCGCTCTATCGCCGCTATCCGCAGATCGGCGGGATCGTGCATACCCATTCCCGCCATGCGACGATCTGGTCGCAGGC
CGGGCTCGATCTGCCCGCCTGGGGCACCACCCACGCCGACTATTTCTATGGCGCGATCCCCTGTACCCGACTGATGACCG
TTGAGGAAATTAACGACGAGTACGAGTATCAGACCGGCGAGGTGATTATTAAAACCTTTGAAGAGCGCGGTCTCGATCCG
GCGCAAATCCCGGCGGTATTAGTTCATTCACACGGCCCGTTTGCCTGGGGTAAAAATGCCGCCGATGCCGTCCACAACGC
CGTGGTGCTTGAGGAGTGCGCCTATATGGGGCTGTTCTCGCGCCAGCTGGCCCCGCAGCTACCGGATATGCAGCCTGAAT
TGCTCGATAAACACTATCTGCGTAAACATGGCGCGAACGCCTATTACGGGCAGTAA

Protein sequence :
MLEQLKAEVLAANLALPAHGLVTFTWGNVSAVDETRKLMVIKPSGVEYEVMTADDMVVVEIANGKVVEGNKKPSSDTATH
LALYRRYPQIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRLMTVEEINDEYEYQTGEVIIKTFEERGLDP
AQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPDMQPELLDKHYLRKHGANAYYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 1e-58 54