Gene Information

Name : SNSL254_A3817 (SNSL254_A3817)
Accession : YP_002042793.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5426
EC number : -
Position : 3692112 - 3692873 bp
Length : 762 bp
Strand : +
Note : identified by match to protein family HMM PF07090

DNA sequence :
ATGAACAATACGCAGAAAAAACTAAAGGTGCTCTTTATTGGAGAATCCTGGCATATTCATATGATTCATTCAAAAGGTTA
TGACAGTTTCACCTCCAGTAAATATGAAGAAGGCGCCACATGGTTACTGGAATGCTTGAGGAAGGGCGGCGTTGATATTG
ATTACATGCCTGCCCACACGGTACAAATTGCCTTTCCAGAGAGTATTGACGAATTAAACCGTTACGATGTGATTGTTATT
AGCGACATTGGTAGTAATACCTTCCTGTTGCAAAACGAGACATTTTATCAGCTAAAAATAAAACCAAACGCTCTGGAGTC
TATTAAAGAGTACGTCAAAAATGGCGGTGGACTACTCATGATTGGCGGTTATCTGTCATTCATGGGTATTGAGGCAAAAG
CCAATTATAAGAACACCGTTCTTGCTGAGGTTCTGCCAGTTATTATGCTTGATGGCGATGACCGGGTAGAAAAGCCCGAG
GGTATCTGTGCTGAGGCTGTCTCACCTGAACATCCTGTTGTTAACGGGTTCTCAGATTACCCGGTATTTCTTGGATATAA
CCAGGCCGTCGCCAGAGACGATGCCGATGTCGTATTAACAATAAATAATGACCCATTGTTAGTGTTCGGTGAATACCAAC
AGGGTAAAACCGCCTGCTTTATGAGTGACTGCTCCCCACACTGGGGAACCCAGCAGTTTATGTCATGGCCATTTTATACC
GACCTGTGGGTCAACACGCTTCAATTCATCGCCAGAAAATAA

Protein sequence :
MNNTQKKLKVLFIGESWHIHMIHSKGYDSFTSSKYEEGATWLLECLRKGGVDIDYMPAHTVQIAFPESIDELNRYDVIVI
SDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLMIGGYLSFMGIEAKANYKNTVLAEVLPVIMLDGDDRVEKPE
GICAEAVSPEHPVVNGFSDYPVFLGYNQAVARDDADVVLTINNDPLLVFGEYQQGKTACFMSDCSPHWGTQQFMSWPFYT
DLWVNTLQFIARK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-103 82
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 4e-77 65
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 3e-77 65
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 4e-77 65
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 9e-77 64
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 9e-77 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SNSL254_A3817 YP_002042793.1 hypothetical protein VFG0482 Protein 2e-77 65