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Name : kdsD (SNSL254_A3576) Accession : YP_002042573.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 3463021 - 3464007 bp Length : 987 bp Strand : + Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGTCGCATTTAGCGTTGCAACCGGGGTTTGACTTTCAGCAGGCAGGCAAAGAGGTCCTGGAAATTGAACGTGAAGGCCT GGCGGAGCTTGATCAATATATCAACCAGCATTTCACGCTGGCCTGTGAAAAAATGTTCAACTGCACCGGAAAAGTGGTGG TCATGGGGATGGGAAAATCCGGTCATATCGGACGGAAAATGGCCGCCACGTTCGCCAGTACCGGCACCTCTTCCTTTTTT GTACATCCGGGCGAAGCCGCGCACGGCGATTTGGGGATGGTTACGCCGCAGGATGTGGTTATCGCTATCTCCAACTCCGG CGAATCCAGCGAGATCGCGGCGCTAATACCGGTACTTAAACGTCTGCACGTGCCGTTAATTTGCATTACCGGGCGACCGG AAAGCAGCATGGCGCGTGCGGCAGATGTGCATCTGTGTGTTAAAGTGCCCAAAGAAGCGTGTCCGTTAGGACTGGCGCCT ACCAGTAGTACCACCGCAACGCTGGTGATGGGCGACGCGCTCGCTGTGGCGTTGTTAAAAGCGCGCGGCTTTACCGCCGA GGATTTCGCTCTGTCGCATCCTGGCGGCGCGCTGGGACGTAAGCTACTGCTGCGCGTAAGCGATATTATGCATACTGGCG ATGAGATCCCGCATGTTAATAAACATGCCACCCTGCGTGATGCGCTGTTAGAAATTACGCGTAAAAATCTCGGTATGACC GTCATTTGCGATGAATCCATGAAGATCGACGGTATCTTCACCGACGGCGATTTACGTCGCGTATTCGATATGGGCGGCGA TATGCGCCAGTTGGGGATCGCCGAGGTGATGACGCCAGGGGGCATTCGCGTGCGTCCCGGTATTCTCGCTGTCGATGCGC TGAATTTAATGCAGTCCCGCCATATCACCTCCGTACTGGTTGCTGATGGCGACCAGTTACTCGGTGTGTTACATATGCAT GATCTCCTGCGTGCAGGCGTCGTGTAG Protein sequence : MSHLALQPGFDFQQAGKEVLEIEREGLAELDQYINQHFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSSFF VHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVPKEACPLGLAP TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMT VICDESMKIDGIFTDGDLRRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQLLGVLHMH DLLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-46 | 41 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-47 | 41 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 6e-47 | 41 |
