|
Name : SNSL254_A3097 (SNSL254_A3097) Accession : YP_002042133.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Virulence Product : antigen presentation protein SpaN Function : - COG functional category : - COG ID : - EC number : - Position : 3011750 - 3012760 bp Length : 1011 bp Strand : - Note : identified by match to protein family HMM PF02510 DNA sequence : ATGGGCGATGTGTCAGCTGTCAGTTCATCCGGGAACATTTTACTGCCGCAGCAGGATGAGGTTGGCGGTTTATCAGAAGC ATTAAAAAAAGCGGTGGAAAAACATAAGACAGAATATTCCGGTGATAAAAAAGATCGCGACTATGGCGATGCTTTCGTAA TGCATAAAGAAACGGCTTTACCGGTATTACTGGCGGCATGGCGACATGGCGCGCCAGCGAAATCAGAACATCACAATGGC AACGTTTCTGGTCTGCATCATAACGGAAAAGGCGAACTCAGGATTGCTGAAAAACTGTTGAAAGTCACTGCTGAAAAATC TGTCGGTTTGATCTCTGCGGAGGCCAAAGTAGATAAATCCGCAGCGTTGCTATCGCCTAAAAATAGGCCGTTAGAAAGCG TAAGCGGTAAAAAATTATCTGCTGATTTAAAAGCTGTGGAATCCGTTAGTGAAGTAACCGATAACGCCACGGGAATCTCT GACGATAATATCAAGGCATTGCCTGGGGATAATAAAGCCATCGCGGGCGAAGGCGTTCGTAAAGAGGGCGCGCCGCTGGC GCGGGATGTCGCACCTGCCCGAATGGCCGCAGCCAATACCGGTAAGCCTGACGATAAAGATCATAAAAAGGTTAAAGATG TTTCTCAGCTTCCGCTGCAACCAACCACTATCGCCGATCTTAGCCAATTAACCGGCGGCGATGAAAAAATGCCTTTAGCG GCGCAATCAAAGCCGATGATGACTATTTTTCCGACTGCCGATGGCGTGAAAGGAGAGGATAGCTCGCTGACTTACCGTTT TCAGCGCTGGGGAAATGACTATTCCGTCAATATTCAGGCGCGGCAAGCAGGGGAGTTTTCGTTAATACCGTCAAATACGC AGGTTGAACATCGTTTGCATGATCAATGGCAAAACGGTAATCCCCAGCGCTGGCACCTGACGCGAGACGATCAACAAAAT CCGCAGCAGCAACAGCACAGACAGCAATCTGGCGAGGAGGATGACGCCTGA Protein sequence : MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETALPVLLAAWRHGAPAKSEHHNG NVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKSAALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGIS DDNIKALPGDNKAIAGEGVRKEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLTRDDQQN PQQQQHRQQSGEEDDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| invJ | NP_461813.1 | needle length control protein | Virulence | SPI-1 | Protein | 1e-133 | 99 |
| spaN | NP_457286.1 | surface presentation of antigens protein (associated with type III secretion and virulence) | Virulence | SPI-1 | Protein | 1e-133 | 99 |
| spaN | NP_806495.1 | antigen presentation protein SpaN | Virulence | SPI-1 | Protein | 1e-133 | 99 |
| invJ | YP_217811.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 6e-134 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SNSL254_A3097 | YP_002042133.1 | antigen presentation protein SpaN | VFG0553 | Protein | 5e-134 | 99 |
