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Name : SNSL254_A3080 (SNSL254_A3080) Accession : YP_002042118.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Virulence Product : transcriptional regulator HilD Function : - COG functional category : K : Transcription COG ID : COG2207 EC number : - Position : 2994340 - 2995269 bp Length : 930 bp Strand : + Note : identified by match to protein family HMM PF00165 DNA sequence : ATGGAAAATGTAACCTTTGTAAGTAATAGTCATCAGCGTCCTGCCGCAGATAACTTACAGAAATTAAAATCACTTTTGAC AAATACCCAGCAGCAAATTAAAAGTCAGACTCAGCAGGTTACCATCAAAAATCTTTATGTAAGCAGTTTCACTTTAGTTT GCTTTCGGAGCGGTAAACTGACGATTAGCAATAATCACGATACGATTTACTGTGACGAACCTGGGATGTTGGTGCTCAAA AAAGAGCAGGTAGTTAACGTGACGCTTGAAGAGGTCAATGGCCACATGGATTTCGATATACTCGAGATACCGACGCAACG ACTTGGCGCTCTCTATGCACTTATCCCAAACGAGCAGCAAACCAAAATGGCGGTACCCACAGAGAAAGCGCAGAAAATCT TCTATACGCCTGACTTTCCTGCCAGAAGAGAGGTATTTGAACATCTGAAAACGGCGTTCTCCTGTACGAAGGATACAAGC AAAGGTTGCAGTAACTGTAACAACAAAAGTTGTATTGAAAATGAAGAGTTAATTCCTTATTTTCTGCTGTTCCTGCTTAC TGCTTTTCTCCGACTCCCGGAGAGTTATGAGATCATCCTTAGCTCGGCTCAGATAACGTTAAAGGAGCGCGTTTACAACA TTATATCTTCGTCACCCAGTAGACAGTGGAAGCTTACGGATGTTGCCGATCATATATTTATGAGTACGTCAACGCTCAAA CGGAAACTTGCAGAAGAAGGTACCAGCTTTAGCGACATCTACTTATCGGCAAGAATGAATCAGGCAGCAAAACTTTTACG CATAGGCAACCATAATGTTAATGCTGTAGCATTAAAATGTGGTTATGATAGCACGTCCTACTTCATTCAATGTTTCAAAA AATATTTTAAAACTACGCCATCGACATTCATAAAAATGGCGAACCATTAA Protein sequence : MENVTFVSNSHQRPAADNLQKLKSLLTNTQQQIKSQTQQVTIKNLYVSSFTLVCFRSGKLTISNNHDTIYCDEPGMLVLK KEQVVNVTLEEVNGHMDFDILEIPTQRLGALYALIPNEQQTKMAVPTEKAQKIFYTPDFPARREVFEHLKTAFSCTKDTS KGCSNCNNKSCIENEELIPYFLLFLLTAFLRLPESYEIILSSAQITLKERVYNIISSSPSRQWKLTDVADHIFMSTSTLK RKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTSYFIQCFKKYFKTTPSTFIKMANH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hilD | YP_217794.1 | regulatory protein | Virulence | SPI-1 | Protein | 1e-127 | 100 |
| STY2996 | NP_457269.1 | AraC-family transcriptional regulator | Not tested | SPI-1 | Protein | 3e-127 | 99 |
| t2777 | NP_806478.1 | AraC family transcriptional regulator | Not tested | SPI-1 | Protein | 3e-127 | 99 |
| hilD | NP_461796.1 | invasion protein regulatory protein | Virulence | SPI-1 | Protein | 2e-128 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SNSL254_A3080 | YP_002042118.1 | transcriptional regulator HilD | VFG0537 | Protein | 8e-129 | 99 |
