Gene Information

Name : eprI (SNSL254_A3078)
Accession : YP_002042116.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : type III secretion apparatus needle protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2992579 - 2992821 bp
Length : 243 bp
Strand : -
Note : identified by match to protein family HMM PF09392; match to protein family HMM TIGR02105

DNA sequence : 
ATGGCAACACCTTGGTCAGGCTATCTGGATGACGTCTCAGCAAAATTTGATACGGGCGTTGATAATCTACAAACGCAGGT
AACAGAGGCGCTGGATAAATTAGCAGCAAAACCCTCCGATCCGGCGCTACTGGCGGCGTATCAGAGTAAGCTCTCGGAAT
ATAACTTGTACCGTAACGCGCAATCGAACACGGTAAAAGTCTTTAAGGATATTGATGCTGCCATTATTCAGAACTTCCGT
TAA

Protein sequence : 
MATPWSGYLDDVSAKFDTGVDNLQTQVTEALDKLAAKPSDPALLAAYQSKLSEYNLYRNAQSNTVKVFKDIDAAIIQNFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgI YP_217792.1 cell invasion protein Virulence SPI-1 Protein 1e-30 100
prgI NP_461794.1 needle complex major subunit Virulence SPI-1 Protein 1e-30 100
prgI AAX49613.1 PrgI Virulence SPI-1 Protein 9e-31 100
prgI NP_457267.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 1e-29 95
prgI NP_806476.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 1e-29 95
ECs3718 NP_311745.1 EprI Not tested LIM Protein 5e-20 63
ysaG AAS66835.1 YsaG Not tested SSR-1 Protein 9e-17 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
eprI YP_002042116.1 type III secretion apparatus needle protein VFG0535 Protein 4e-31 100
eprI YP_002042116.1 type III secretion apparatus needle protein VFG0996 Protein 2e-19 69
eprI YP_002042116.1 type III secretion apparatus needle protein VFG2466 Protein 1e-17 56