Gene Information

Name : SNSL254_A3075 (SNSL254_A3075)
Accession : YP_002042113.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : type III secretion apparatus protein OrgA/MxiK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2990929 - 2991507 bp
Length : 579 bp
Strand : -
Note : identified by match to protein family HMM PF09482; match to protein family HMM TIGR02555

DNA sequence :
ATGAATAGGCAGCCATTACCCATTATCTGGCAAAGAATCATTTTTGATCCGTTATCGTATATCCATCCTCAGCGGTTGCA
GATAGCGCCGGAAATGATTGTCAGACCCGCCGCCAGGGCGGCGGCAAATGAGTTAATACTGGCGGCATGGCGGCTTAAGA
ACGGAGAAAAGGAGTGTATTCAAAACTCACTGACGCAGCTGTGGCTGCGTCAGTGGCGCCGACTGCCGCAAGTAGCGTAT
TTACTCGGTTGCCATAAACTGAGAGCCGATCTGGCAAGGCAGGGAGCCTTGCTTGGCCTGCCGGATTGGGCGCAAGCATT
TTTGGCAATGCATCAGGGAACAAGTTTATCTGTCTGCAATAAGGCGCCGAATCACCGGTTTTTACTTAGCGTCGGGTATG
CACAGTTAAATGCCCTAAATGAATTTTTACCTGAATCTTTAGCACAGCGTTTTCCTTTGCTTTTTCCTCCATTTATTGAG
GATGCATTGAAGCAGGATGCTGTAGAAATGTCAATTTTGCTACTGGCCTTACAATATGCTCAAAAATATCCCAATACCGT
CCCCGCTTTCGCCTGTTGA

Protein sequence :
MNRQPLPIIWQRIIFDPLSYIHPQRLQIAPEMIVRPAARAAANELILAAWRLKNGEKECIQNSLTQLWLRQWRRLPQVAY
LLGCHKLRADLARQGALLGLPDWAQAFLAMHQGTSLSVCNKAPNHRFLLSVGYAQLNALNEFLPESLAQRFPLLFPPFIE
DALKQDAVEMSILLLALQYAQKYPNTVPAFAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orgAa NP_457264.1 cell invasion protein Virulence SPI-1 Protein 4e-73 99
orgA NP_806473.1 oxygen-regulated invasion protein Virulence SPI-1 Protein 4e-73 99
orgA YP_217789.1 inner membrane protein Not tested SPI-1 Protein 3e-73 99
orgA NP_461791.1 needle complex assembly protein Virulence SPI-1 Protein 2e-73 99