Gene Information

Name : SNSL254_A3074 (SNSL254_A3074)
Accession : YP_002042112.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : oxygen-regulated invasion protein OrgB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2990292 - 2990972 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGCTCAAAAATATCCCAATACCGTCCCCGCTTTCGCCTGTTGAGGGGATACTGATAAAGCGTAAAACGCTGGAACGTTA
TTTCTCTATTGAAAGATTAGAACAGCAGGCGCATCAACGGGCTAAGCGTATTTTGCGAGAGGCGGAAGAAGAGGCAAAGA
CCTTGCGGATGTACGCCTATCAGGAAGGTTACGAGCAGGGAATGATAGACGCGTTACAGCAGGTCGCCGCTTATCTTACT
GATAATCAGACAATGGCCTGGAAGTGGATGGAAAAAATACAGATTTATGCCCGCGAGTTATTTTCAGCTGCGGTCGACCA
TCCCGAAACGCTTTTAACCGTCCTGGATGAGTGGCTAAGGGATTTCGATAAGCCTGAGGGGCAACTTTTTTTAACACTGC
CAGTTAATGCGAAAAAAGATCACCAAAAACTGATGGTGTTGCTTATGGAGAACTGGCCAGGCACTTTTAATCTTAAATAT
CATCAGGAACAGCGCTTTATCATGAGTTGCGGCGATCAGATCGCAGAATTTTCACCTGAACAATTTGTTGAAACGGCAGT
AGGCGTCATTAAGCATCATCTTGATGAACTTCCACAAGACTGCCGGACAATTTCTGATAACGCCATTAACGCACTTATTG
ATGAATGGAAGACAAAAACGCAAGCGGAGGTTATAAGGTGA

Protein sequence : 
MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRILREAEEEAKTLRMYAYQEGYEQGMIDALQQVAAYLT
DNQTMAWKWMEKIQIYARELFSAAVDHPETLLTVLDEWLRDFDKPEGQLFLTLPVNAKKDHQKLMVLLMENWPGTFNLKY
HQEQRFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAINALIDEWKTKTQAEVIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orgB YP_217788.1 flagellar biosynthesis/type III secretory pathway protein Not tested SPI-1 Protein 1e-104 100
orgB NP_461790.1 needle complex export protein Virulence SPI-1 Protein 1e-104 100
orgAb NP_457263.1 cell invasion protein Virulence SPI-1 Protein 2e-102 99
orgA NP_806472.1 oxygen-regulated invasion protein Virulence SPI-1 Protein 2e-102 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SNSL254_A3074 YP_002042112.1 oxygen-regulated invasion protein OrgB VFG0532 Protein 5e-105 100