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Name : SNSL254_A3072 (SNSL254_A3072) Accession : YP_002042110.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Virulence Product : araC family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG2207 EC number : - Position : 2988611 - 2989498 bp Length : 888 bp Strand : - Note : identified by match to protein family HMM PF00165 DNA sequence : ATGGTATTGCCTTCAATGAATAAATCAGTTGAGGCCATTAGCAATAATCACCTTCAACAGCCGAACAAATTTCCATTAAT AAATGGATTAGCTGACGTAAGAGACTATTATGTCGCAAACTGCTTATTGTTTAAACTTAATAAAGGCAGTTTGCGAATTG AAAACGAATTTGGGGAGTTCATCGAACAATCTGCGCCGTGTTTATTTTTATTGGAAAAAGATCAAACAATCACGCTTAGT ATGAGCGAAATAGAAGGGCATATTGATTTTTCTTCACTGGAAGTTTCCTATGACTTAATGCAAAAATTCTACAAAGTTTT TTACAGTACAAGAAACTATAATGATCGAGAGCTATCATTAAAAACGAAACCAAAGTATTTTTTTCATGCGGACTTGTTGC CAGGGATGAGTGATACTTTTGACTCTATTTTGCATGGTGTGGCATGTCCACGGGTTTGTAGTAATGTGAGTATTGATGAT CATGATTATTCATATTTCTCATTGATGTATCTTATATCGGCATTTGTACGTAAGCCCGGTGGGTTTGATTTCCTTGAGCG AGCAATAAAAATTACGACAAAAGAGAAAGTTTATAACATTATTATCAGCGATCTCACCCGCAAATGGTCACAGGCTGAGG TGGCAGGAAAGCTGTTTATGAGCGTATCAAGTCTGAAGCGAAAACTGGCCGCTGAAGAGGTGAGTTTTAGCAAAATATAC CTGGATGCTCGTATGAATCAGGCTATAAAATTATTACGTATGGGGGCTGGAAATATTTCACAAGTCGCGACGATGTGTGG CTATGATACGCCTTCTTATTTTATCGCTATTTTTAAACGGCATTTTAAGATTACACCGCTTAGCTTTATGCGTACAATGA ACCATTGA Protein sequence : MVLPSMNKSVEAISNNHLQQPNKFPLINGLADVRDYYVANCLLFKLNKGSLRIENEFGEFIEQSAPCLFLLEKDQTITLS MSEIEGHIDFSSLEVSYDLMQKFYKVFYSTRNYNDRELSLKTKPKYFFHADLLPGMSDTFDSILHGVACPRVCSNVSIDD HDYSYFSLMYLISAFVRKPGGFDFLERAIKITTKEKVYNIIISDLTRKWSQAEVAGKLFMSVSSLKRKLAAEEVSFSKIY LDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSFMRTMNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hilC | YP_217786.1 | AraC family transcriptional regulator | Not tested | SPI-1 | Protein | 5e-138 | 100 |
| sprA | AAD37784.1 | transcriptional regulator SprA | Virulence | SPI-1 | Protein | 1e-137 | 99 |
| sprA | NP_457261.1 | possible AraC-family transcriptional regulator | Virulence | SPI-1 | Protein | 7e-137 | 99 |
| sprA | NP_806470.1 | AraC family transcriptional regulator | Virulence | SPI-1 | Protein | 7e-137 | 99 |
| hilC | NP_461788.1 | invasion regulatory protein | Virulence | SPI-1 | Protein | 1e-137 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SNSL254_A3072 | YP_002042110.1 | araC family transcriptional regulator | VFG0531 | Protein | 6e-138 | 99 |
