Gene Information

Name : SNSL254_A2967 (SNSL254_A2967)
Accession : YP_002042013.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Unknown
Product : DNA-invertase hin
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 2891481 - 2892047 bp
Length : 567 bp
Strand : +
Note : identified by match to protein family HMM PF00239; match to protein family HMM PF02796

DNA sequence :
ATGGCTACTATTGGGTATATTCGGGTGTCAACAATTGACCAAAATATCGATTTACAGCGTAATGCGCTTACTAGTGCAAA
TTGTGACCGCATTTTTGAAGACCGTATCAGTGGCAAGATTGCAAACCGCCCCGGCCTGAAACGGGCGTTAAAGTATGTAA
ATAAAGGCGATACTCTTGTCGTCTGGAAATTAGACAGACTGGGCCGTAGCGTGAAAAATCTGGTGGCGTTAATATCAGAA
TTACATGAACGTGGAGCTCACTTCCATTCTTTAACCGATAGTATTGATACCAGTAGCGCGATGGGGCGATTCTTTTTTCA
TGTAATGTCAGCACTGGCCGAGATGGAGCGAGAATTAATCGTCGAGCGAACCCTTGCCGGACTGGCTGCCGCCAGAGCGC
AAGGACGACTGGGAGGGCGCCCTCGGGCGATCAACAAACATGAACAGGAACAGATTAGTCGGCTATTAGAGAAAGGCCAT
CCTCGGCAGCAACTAGCTATTATTTTTGGTATTGGCGTATCTACCTTATACAGATATTTTCCGGCAAGCCGCATAAAAAA
CGAATGA

Protein sequence :
MATIGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWKLDRLGRSVKNLVALISE
LHERGAHFHSLTDSIDTSSAMGRFFFHVMSALAEMERELIVERTLAGLAAARAQGRLGGRPRAINKHEQEQISRLLEKGH
PRQQLAIIFGIGVSTLYRYFPASRIKNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 6e-43 60
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 8e-31 51
res AGF34985.1 resolvase Not tested SGI1 Protein 8e-31 51
res AGF35025.1 resolvase Not tested SGI1 Protein 8e-31 51
res AGF35059.1 resolvase Not tested SGI1 Protein 8e-31 51
res AGK06929.1 resolvase Not tested SGI1 Protein 8e-31 51
res AGK06966.1 resolvase Not tested SGI1 Protein 8e-31 51
res AGK07012.1 resolvase Not tested SGI1 Protein 8e-31 51
res AGK07070.1 resolvase Not tested SGI1 Protein 8e-31 51
res AAK02044.1 resolvase Not tested SGI1 Protein 8e-31 51
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 5e-32 47
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 1e-32 47
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 1e-32 47
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 3e-21 46
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 3e-21 46
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 2e-21 46