Gene Information

Name : SNSL254_A2951 (SNSL254_A2951)
Accession : YP_002041997.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2876970 - 2877980 bp
Length : 1011 bp
Strand : +
Note : identified by match to protein family HMM PF00589

DNA sequence :
ATGGCGGTTCGTAAAATAGACTCTGGCGAATGGCTATGCGACCTGCGGCCTACTGGCGTCAAGGGAAAACGCATTCGCAA
AAAATTTGCCACTAAAGGCGAAGCGCTGGCTTATGAAAAATACATTGCCAGCGAAATGGAAGAAAAGCCATGGTTAGGTG
AAAAGCAAGATAATCGACGACTATCAGAACTGATTGAACAGTGGCACGACCTTTACGGCCGTACACTCTCTGATGCGGAT
CGGATGATGTCAAAATTGAAAGGTATCTGTGCGGGCATGGGCGATCCCATAGCGGCACAAATCACATCCGCAGATTTTAG
CCAATATCGTGAGGGCCGATTAAAAGGTGAAATTCCCGATGTTAACGGTCGACTAATGCCGATACAGCCCCAGACGGTAA
ATCATGAGCAGCGCAACCTCTCAGCTGTATTTGGTACGCTAAAAAAACTGGGGCACTGGTCATTACCTAATCCTCTGGCA
GGTATTCCAACATTCAAAGTTGATGAAAAAATGGTTTCTTTTTTGTACCCAGAAGAGATCAAAAGCCTGCTGCAATACCT
ATCAGAATCAAGCAGTGATAGCGTACTTATAATCACCAAAATCTGCTTGGCTACAGGGGCCAGATGGAGTGAGGCCGAAA
ATTTAGAAGGTGCGCAGGTCACGCCGTATCGGATAACCTACAAGAACACCAAAAATGGAAGAGTCAGATCGATTCCTATC
TCGAAAGAACTGTATGACGAAATTCCGAAAAAACGTGGGCGTTTGTTCACGCCATGCCGTAAGACTTTTGAACGAGTAGT
GGCTAAAGCGGGCATTGAGTTACCTGACGGGCAATGCACACACGTACTGCGTCATACATTTGCCAGTCATTTTATGATGA
ACGGTGGAAACATCCTTGTCCTCAAAGAAATACTTGGGCATTCAGATATAAAAATGACAATGATTTACGCACATTTCGCG
CCTACACATTTAGAAGATGCTGTACTTAAAAACCCTTTGGCTAACCTTTAA

Protein sequence :
MAVRKIDSGEWLCDLRPTGVKGKRIRKKFATKGEALAYEKYIASEMEEKPWLGEKQDNRRLSELIEQWHDLYGRTLSDAD
RMMSKLKGICAGMGDPIAAQITSADFSQYREGRLKGEIPDVNGRLMPIQPQTVNHEQRNLSAVFGTLKKLGHWSLPNPLA
GIPTFKVDEKMVSFLYPEEIKSLLQYLSESSSDSVLIITKICLATGARWSEAENLEGAQVTPYRITYKNTKNGRVRSIPI
SKELYDEIPKKRGRLFTPCRKTFERVVAKAGIELPDGQCTHVLRHTFASHFMMNGGNILVLKEILGHSDIKMTMIYAHFA
PTHLEDAVLKNPLANL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4645 NP_458725.1 phage integrase Not tested SPI-7 Protein 2e-118 68
t4338 NP_807932.1 phage integrase Not tested SPI-7 Protein 2e-118 68