|
Name : SNSL254_A2417 (SNSL254_A2417) Accession : YP_002041498.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Unknown Product : helicase Function : - COG functional category : K : Transcription COG ID : COG1061 EC number : - Position : 2335770 - 2337530 bp Length : 1761 bp Strand : + Note : identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851 DNA sequence : ATGATTTTTACACTCCGCCCCTACCAGCAAGAAGCCGTAGACGCCACGCTCAGCCACTTTCGCCGCCACCGTACGCCCGC CGTGATTGTTCTGCCGACCGGCGCAGGTAAAAGCCTGGTGATCGCCGAACTGGCGCGCGTCGCCCGCGGACGGGTACTGG TGCTGGCGCATGTGAAAGAGCTGGTCGCGCAGAACCACGCCAAATATTGCGCGCTGGGGCTGGAAGCGGATATTTTCGCC GCCGGACTCAAACGTAAAGAGAGTCAGGGCAAAGTCGTGTTCGGCAGCGTACAGTCGGTGGCGCGTAATCTTGACGCCTT CCAGGAGGAGTTTTCGCTGTTGATTGTCGATGAATGCCACCGCATCGGTGACGATGAAGACAGTCAGTATCAGCAAATCC TCACTCACCTGAGTAAAGTTAATCCTCACTTACGTCTGCTTGGGCTCACCGCCACGCCCTTCCGCCTCGGAAAAGGCTGG ATTTATCAATTTCATTACCACGGTATGGTGCGCGGCAACGACAACGCGCTGTTTCGCGACTGTATTTATGAACTGCCGCT GCGCTATATGATTAAACACGGCTATCTGACGCCGCCTGAGCGGCTTGATATGCCAGTGGTCCAATACGATTTCAGTCGCC TGCAGGCCCAAAGCAATGGGCTGTTCAGCGAAGCCGACCTGAACCGCGAGCTGAAAAAGCAGCAGCGGATTACGCCGCAC ATCATCAGCCAGATTATGGAATTTGCGCAAACGCGCAAAGGCGTGATGATTTTCGCCGCCACGGTCGAACATGCGAAAGA GATTGTCGGTCTGCTTCCGGCGGACGACGCGGCGCTGATTACCGGCGATACGCCAGGGCCCGAGCGCGACGCGCTGATTG ATAATTTCAAGGCGCAGCGTTTTCGCTATCTGGTTAACGTCTCGGTGCTGACCACCGGCTTTGACGCCCCACACGTTGAT CTCATCGCGATTCTACGTCCCACGGAGTCAGTTAGTCTTTACCAACAAATTGTCGGGCGTGGTCTGCGCCTTGCGCCGGG AAAGACCGATTGCCTGATTCTTGATTACGCAGGCAACCCGCACGACCTGTATGCCCCGGAGGTCGGTAGCCCGAAGGGAA AAAGCGATAACGTCCCTGTCCAGGTATTTTGCCCGGCCTGCGGCTTTGCCAACACCTTCTGGGGGAAAACCACTGCCGAC GGCACGCTGATTGAACACTTTGGCCGTCGCTGCCAGGGCTGGTTTGAGGATGACGACGGCCATCGCGAGCAGTGCGATTT TCGCTTTCGCTTCAAAAACTGCCCGCAGTGTAATGCCGAAAACGATATTGCCGCCCGACGCTGCCGGGAATGTGACGCTA TTCTGGTCGACCCGGACGATATGTTAAAAGCGGCGCTCAGGCTCAAGGATGCGTTAGTCCTGCGCTGTAGCGGAATGACG ATGCAGCATGGGCAGGATGAGAAAGGCGAATGGCTGAAAATCACTTACTATGACGAGGACGGCGCGGATGTCAGTGAGCG CTTCCGCTTGCACACGCCCGCCCAGCGTACCGCTTTCGAACAGCTATTTATTCGCCCGCATACCCGCACGCCCGGCGTTC CTTTACGCTGGATCACGGCGGCGGATATTGTCGCGCAGCAGGCGCTGTTGCGGCATCCCGATTTTGTGGTCGCGCGGATG AAAGGCCAGTACTGGCAGGTGCGTGAAAAAGTGTTCGACTATGAAGGCCGCTTCCGCCGAGCGCACGAATTACGTGGTTA A Protein sequence : MIFTLRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKELVAQNHAKYCALGLEADIFA AGLKRKESQGKVVFGSVQSVARNLDAFQEEFSLLIVDECHRIGDDEDSQYQQILTHLSKVNPHLRLLGLTATPFRLGKGW IYQFHYHGMVRGNDNALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH IISQIMEFAQTRKGVMIFAATVEHAKEIVGLLPADDAALITGDTPGPERDALIDNFKAQRFRYLVNVSVLTTGFDAPHVD LIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGSPKGKSDNVPVQVFCPACGFANTFWGKTTAD GTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRECDAILVDPDDMLKAALRLKDALVLRCSGMT MQHGQDEKGEWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITAADIVAQQALLRHPDFVVARM KGQYWQVREKVFDYEGRFRRAHELRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_01052 | YP_001437156.1 | hypothetical protein | Not tested | Not named | Protein | 0.0 | 89 |
