Gene Information

Name : SNSL254_A2300 (SNSL254_A2300)
Accession : YP_002041388.2
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Unknown
Product : polysaccharide biosynthesis/export protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2212921 - 2214060 bp
Length : 1140 bp
Strand : -
Note : identified by match to protein family HMM PF02563

DNA sequence :
ATGATGAAATCCAAAATGAAATTGATGCCATTATTGGCGTCGCTCAGCTTGATAAGTGGTTGCACAGTACTTCCGGGCAG
CAATATGTCTACGATGGGGAAAGATGTGATCAAACAGCAAGACGCTGACTTTGATCTCGACCGGATGGTCAATGTGTATC
CGCTGACGCCACGGTTGGTTGAGCAATTACGCCCGCGGCCCAATGTCGCGCAACCGAATATGTCGCTGGACCAGGAGATC
GCCAGCTATCAGTATCGCGTCGGGCCTGGCGATGTGCTGAATGTCACCGTCTGGGATCACCCGGAATTGACCACGCCAGC
AGGCCAGTACCGTAGCTCAAGCGATACCGGCAACTGGGTACAGCCGGACGGCACCATGTTTTATCCCTACATTGGCAAGG
TTAGCGTCGTCGGTAAAACTTTGTCAGAGATTCGTAGCGATATTACCGGGCGTTTAGCGAAGTACATTGCGGACCCGCAG
GTGGATGTCAATATCGCCGCTTTCCGCTCGCAAAAAGCGTACATCTCCGGCCAGGTGAATAAATCCGGTCAGCAGGCTAT
TACTAACGTACCGCTAACCGTCCTGGATGCGATTAACGCTGCGGGCGGCCTGACCGATATGGCGGACTGGCGCAACGTCG
TGTTGACGCACAACGGCAAAGAACAGCGCATTTCGCTACAGGCGCTGATGCAAAATGGCGATCTTAGCCAGAACCGCTTG
CTCTACCCTGGCGACATTCTGTATGTGCCGCGCAATGACGATCTGAAAGTCTTTGTCATGGGCGAAGTGAAAAAACAGAG
CACCCTCAAAATGGATTTCAGCGGCATGACGCTCACCGAAGCATTAGGCAATGCGGAAGGCATTGATCTGACCACCTCCA
ACGCCAGCGGCATTTTTGTGATTCGTCCGTTGAAAGGCGAGGGGGGACGCGGCGGCAAGATCGCCAATATCTACCAGCTT
GATATGTCTGACGCCACGTCATTGGTGATGGCGACGGAATTCCGACTTCAGCCTTACGATGTGGTGTACGTCACGACCGC
GCCGGTTGCTCGCTGGAACCGTCTGATCAATCAGTTGCTGCCAACCATTAGCGGTGTCCGTTATATGACGGATACGGCCA
GCGACATTCATTCCTGGTAA

Protein sequence :
MMKSKMKLMPLLASLSLISGCTVLPGSNMSTMGKDVIKQQDADFDLDRMVNVYPLTPRLVEQLRPRPNVAQPNMSLDQEI
ASYQYRVGPGDVLNVTVWDHPELTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVSVVGKTLSEIRSDITGRLAKYIADPQ
VDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTVLDAINAAGGLTDMADWRNVVLTHNGKEQRISLQALMQNGDLSQNRL
LYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGMTLTEALGNAEGIDLTTSNASGIFVIRPLKGEGGRGGKIANIYQL
DMSDATSLVMATEFRLQPYDVVYVTTAPVARWNRLINQLLPTISGVRYMTDTASDIHSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf39 AAO18064.1 Orf39 Not tested TTSS locus Protein 2e-125 67