|
Name : umuC (SNSL254_A2162) Accession : YP_002041262.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Unknown Product : DNA polymerase V subunit UmuC Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 2084143 - 2085411 bp Length : 1269 bp Strand : - Note : binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization DNA sequence : ATGTTCGCGCTCTGCGATGTTAATAGCTTTTACGCCTCCTGCGAAACGGTCTTTCGTCCTGATTTATGTGGCCGACCGGT GGTGGTGTTATCAAACAATGATGGCTGCGTTATCGCGTGTAGCGCCGAGGCGAAGCAGCTCGGTATCGCACCAGGTGAGC CATACTTCAAACAGAAAGAACGCTTCCGGCGATCCGGTGTTGTTTGCTTCAGCAGTAATTACGAGCTTTACGCTGATATG TCGAACCGGGTAATGACCACACTCGAGGAGATGGTGCCGCGGGTAGAAATTTACAGCATTGATGAGGCTTTTTGTGATCT GACGGGGGTACGAAACTGCCGGGATCTGACAGATTTCGGGCGCGAGATAAGAGCGACGGTCCTGAAGCGCACGCACCTGA CTGTCGGTGTAGGCATTGCCCAGACGAAAACCCTTGCCAAGCTGGCTAACCATGCTGCGAAAAAGTGGCAGCACCAGACC GGCGGGGTGGTTGACTTGTCGAACATCGATCGCCAGCGTCGGCTGCTGGCCCTGATACCCGTAGAGGATGTCTGGGGTGT CGGCAGGCGCATCAGTAAGAAGCTAAATGCCCTGGGCATCAAGACTGCTCTCGATCTCTCTGAACAAAGTACCTGGATCA TCAGGAAACACTTCAATGTCGTGCTGGAGCGTACCGTGAGAGAGCTTCGCGGAGAGCCATGTCTGGAGCTTGAAGAGTTT GCGCCGGCAAAGCAGGAAATCGTTTGTAGCCGCTCTTTCGGCGAGCGGGTCACAGACTATGAGGAAATGCGCCAGGCTGT TTACAGCTACGCTGCGCGCGCGGCAGAAAAACTCCGCGGCGAGCACCAGTACTGCCGTTTCATCTCAACATTCGTCAAAA CATCCCCCTTTGCCCTGAACGAGCCCTACTACGGTAACAGCGCCGCAGTGACGCTTCTCACCCCCACGCAGGATTCACGC GACATTATCAATGCGGCTGTGAAATGCCTGGATAAAATCTGGCGCGACGGCCATCGCTACCAGAAAGCGGGGGTGATGCT GGGTGACTTCTTCAGTCAGGGCGTAGCGCAACTCAACCTTTTCGACGATAACGCGCCGCGCGCCGGTAGTGCGAAGTTGA TGGAAGTACTGGACCATCTTAACGCAAAAGACGGGAAGGGGACGCTGTACTTCGCCGGGCAGGGGATGTCGCAACAGTGG GCTATGAAGCGAGAAATGCTTTCGCCTCGGTACACCACAAGATACTCTGATCTACTGCGTGTTAAGTAA Protein sequence : MFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYFKQKERFRRSGVVCFSSNYELYADM SNRVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQHQT GGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEF APAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSR DIINAAVKCLDKIWRDGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQW AMKREMLSPRYTTRYSDLLRVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 5e-122 | 63 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 5e-122 | 63 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-91 | 51 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 4e-79 | 50 |
