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Name : SNSL254_A1996 (SNSL254_A1996) Accession : YP_002041111.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Virulence Product : guanine nucleotide exchange factor SopE Function : - COG functional category : - COG ID : - EC number : - Position : 1950380 - 1951102 bp Length : 723 bp Strand : - Note : identified by match to protein family HMM PF05364; match to protein family HMM PF07487 DNA sequence : GTGACTAACATAACACTATCCACCCAGCACTACAGAATCCATAGAAGTGACGTTGAACCAGTAAAAGAAAAAACAACGGA GAAGGACATTTTTGCAAAAAGTATTACTGCCGTTAGAAATAGCTTTATCAGCCTGTCGACGAGTCTGTCAGATCGTTTTA GCCTGCATCAACAAACAGACATACCGACTACCCATTTTCATCGTGGGAACGCTTCTGAGGGTAGGGCGGTATTAACCAGT AAAACTGTTAAAGATTTTATGCTGCAAAAGCTCAATAGTCTGGATATCAAAGGTAATGCGAGTAAAGATCCGGCCTATGC TCGTCAGACATGCGAAGCCATATTATCAGCCGTGTACAGTAATAATAAAGATCAATGTTGTAAATTACTCATCAGTAAAG GGGTCAGTATTACCCCCTTTCTGAAAGAGATAGGAGAGGCTGCGCAGAATGCGGGGCTACCTGGGGAGATAAAAAATGGC GTATTTACTCCAGGTGGGGCAGGGGCGAATCCTTTTGTCGTCCCCCTCATTGCTTCCGCGAGTATTAAATATCCGCATAT GTTTATAAATCATAATCAGCAGGTATCTTTTAAAGCGTATGCTGAGAAAATCGTTATGAAAGAGGTTACGCCGCTGTTTA ATAAGGGGACGATGCCAACGCCACAACAATTTCAGTTAACTATAGAAAATATTGCGAATAAGTATCTTCAGAATGCCTCC TGA Protein sequence : MTNITLSTQHYRIHRSDVEPVKEKTTEKDIFAKSITAVRNSFISLSTSLSDRFSLHQQTDIPTTHFHRGNASEGRAVLTS KTVKDFMLQKLNSLDIKGNASKDPAYARQTCEAILSAVYSNNKDQCCKLLISKGVSITPFLKEIGEAAQNAGLPGEIKNG VFTPGGAGANPFVVPLIASASIKYPHMFINHNQQVSFKAYAEKIVMKEVTPLFNKGTMPTPQQFQLTIENIANKYLQNAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sopE | NP_458691.1 | invasion-associated secreted protein. | Virulence | SPI-7 | Protein | 4e-82 | 70 |
| sopE | NP_807899.1 | invasion-associated secreted protein | Virulence | SPI-7 | Protein | 4e-82 | 70 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SNSL254_A1996 | YP_002041111.1 | guanine nucleotide exchange factor SopE | VFG0467 | Protein | 1e-111 | 100 |
