Gene Information

Name : dksA (SNSL254_A0203)
Accession : YP_002039422.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Unknown
Product : RNA polymerase-binding transcription factor
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 218549 - 219004 bp
Length : 456 bp
Strand : -
Note : identified by match to protein family HMM PF01258; match to protein family HMM TIGR02420

DNA sequence :
ATGCAAGAAGGGCAAAACCGTAAAACATCGTCCCTGAGTATTCTCGCCATCGCTGGGGTGGAGCCGTACCAGGAGAAACC
GGGCGAAGAGTATATGAACGAAGCCCAGCTATCGCACTTCAAGCGTATTCTTGAAGCATGGCGTAATCAACTCCGGGATG
AAGTCGATCGCACTGTGACGCACATGCAGGACGAAGCCGCCAACTTCCCCGATCCGGTCGATCGCGCCGCGCAGGAAGAG
GAGTTTAGCCTGGAGTTACGTAATCGTGACCGTGAGCGCAAACTGATCAAAAAGATCGAGAAGACGCTGAAGAAAGTGGA
AGATGAAGACTTCGGTTATTGCGAGTCCTGCGGGGTGGAGATTGGTATCCGCCGCCTGGAAGCGCGTCCAACAGCCGATC
TGTGCATCGACTGCAAAACGCTGGCTGAAATTCGCGAAAAACAGATGGCGGGTTAA

Protein sequence :
MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLSHFKRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEE
EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00314 YP_008207779.1 DnaK suppressor protein Not tested AbaR25 Protein 3e-38 66
BJAB0868_00318 YP_008211644.1 DnaK suppressor protein Not tested AbaR26 Protein 3e-38 66