|
Name : SNSL254_A0192 (SNSL254_A0192) Accession : YP_002039411.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Virulence Product : chaperone protein FimC Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 209804 - 210487 bp Length : 684 bp Strand : - Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753 DNA sequence : ATGAATTCATTGGCTAAAGCAGGGTTGCTTTGTTGCCTGTTGTGCGGTTCGCTGGCGCATGCCGCAGGGATAAACATCGG CACAACGCGGGTTATTTTTCACGGCGATGCCAAAGATGCGTCCATATCGATAAGCAATAGCGACAACGTTCCCTATTTAA TTCAGTCCTGGGCGCAATCGATCAGTGAAACCGGGGCGAGCGGTGATGCGCCGTTTATGGTCACCCCGCCGCTTTTTCGC CTTAATGGCGGGCAAAAGAACGTACTACGAATTATCCGTACCGGCGGCAATTTGCCGGAAGATCGCGAGTCGCTGTACTG GCTGGATATTAAATCGATTCCCAGCAGCAATCCGGACAATAAACACAACACACTCATGCTGGCCGTTAAAGCGGAATTTA AGCTGATTTACCGGCCAAAAGCGTTAACCCAAAAACCAGAAGAGGTTGCCGATCGATTAACGTGGTCGCGTCAGGGTCGC ACGCTCACCGTGAAGAACCCCACGCCCTATTATATGAACTTCGCCACCCTTTCCGTTGGCAGTCAAAAAGTGAAAGCCCC GCGCTATGTGGCGCCTTTCGGCAACGCGCAGTATACGCTGCCTGCCGCCGCCAGCGGCCCGATTGTCTGGTCTATCATCA ACGATTTTGGCGGTACTGGCCCCGAACATAAACAAACGCCTTGA Protein sequence : MNSLAKAGLLCCLLCGSLAHAAGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGASGDAPFMVTPPLFR LNGGQKNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGR TLTVKNPTPYYMNFATLSVGSQKVKAPRYVAPFGNAQYTLPAAASGPIVWSIINDFGGTGPEHKQTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safB | NP_454906.1 | periplasmic fimbrial chaperone protein | Not tested | SPI-6 | Protein | 4e-41 | 42 |
| fim2C | AFH78430.1 | putative fimbrial chaperone protein | Virulence | KpGI-5 | Protein | 5e-37 | 41 |
