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Name : nifJ (SNSL254_A1768) Accession : YP_002040899.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Virulence Product : pyruvate:ferredoxin (flavodoxin) oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 1738478 - 1742002 bp Length : 3525 bp Strand : + Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176 DNA sequence : ATGCAAACAATTGACGGTAATGGCGCGGTAGCGTCGGTGGCGTTCCGTACCAGCGAGGTTATCGCCATTTACCCGATTAC GCCCAGTTCAACAATGGCTGAACAAGCGGATGCCTGGGCCGGTAATGGGCTTAAAAATGTCTGGGGCGATACGCCGCGTG TGGTAGAGATGCAGTCGGAAGGCGGCGCGATCGCCGCCGTTCACGGTGCGTTACAAACCGGTTCGCTTTCTACGTCATTT ACATCATCGCAGGGGCTGCTGCTGATGATTCCAACGCTGTATAAACTGGCGGGGCAGCTCACGCCGTTTGTACTGCACGT TGCCGCGCGCACCGTCGCCACACACGCGCTTTCTATTTTTGGCGACCATTCCGATGTGATGGCGGTCCGCCAGACAGGCT GCGCGATGTTATGCGCCGCCAGCGTTCAGGAAGCGCAGGATTTTGCGCTGATCGCGCACAGGGCTACGCTGAAAAGCCGC GTTCCGTTTATTCATTTTTTTGATGGCTTCCGTACATCGCATGAAATCAACAAAATTATACCGCTAACGGATGAAACCAT TCTGAACCTGATGCCGCAGGCGGAGATCGACGCTCACCGCGCCCGCGCGCTGAATCCGGAACATCCGGTGATTCGTGGAA CTTCAGCGAATCCGGACACCTACTTCCAGTCTCGCGAAGCGACCAATCCGTGGTACAACGCCGTTTATGATCATGTTGAA GAGGCGATGAAGGCATTTGGCGACGCTACGGGCCGCCACTATCAGCCATTTGAATATTATGGCCATCCCCAGGCTGAACG CGTCATCATTATGATGGGCTCCGCCCTCGGCACCTGCGAAGAGGTCGTGGACGAGCTACTGATACGCGGAGAAAAGGTTG GTGTTCTGAAAGTCCGTCTGTTCCGTCCCTTCTCCGCCAAACATTTGTTACAGGCATTACCGGAAACCGTTCGCGCTATC GCCGTGCTGGATCGTACCAAAGAGCCTGGCGCGCAGGCCGAGCCGCTTTATCTGGACGTGATGACCGCACTGGCGGAAGC CTTTAATAATGGCGAGCGCGAAACGTTGCCGCGCACCATTGGCGGCCGTTATGGGCTATCATCCAAAGAGTTCGGCCCGG CGTGCGTACTGGCGGTCTTTAATGAACTCAGCCGCGCGAAACCCAAACCACGGTTTACGGTGGGCATTTATGATGACGTT ACTAACCTCTCGCTGCCATTACCGGAAAATACCCTGCCCGGCAGCGCTAAACTGGAAGCGTTATTTTACGGCCTGGGAAG CGACGGCAGCGTATCCGCCACGAAAAATAATATTAAAATTATCGGTAATTCTACGCCGTGGTATGCGCAAGGTTATTTCG TTTATGACTCTAAAAAAGCTGGCGGGCTCACGGTATCGCACCTGCGCGTCAGCGAAAAACCCATTCGTTCCGCTTACTTA ATTGCTCAGGCGGATTTTGTCGGCTGCCATCAATTACAGTTTATCGATAAATATCAGATGGCGGAACGTCTAAAGCCCGG CGGTATCTTTCTGCTTAATACGCCGTACAGCGCCGACGAGGTCTGGTCGCGTCTGCCGCAAGAAGTTCAGGCGGTGTTGA ATCAGAAAAAGGCGCGTTTTTACGTGGTTAACGCGGCGAAAATCGCCCGCGAATGTGGACTTGGCGCCCGCATCAATACC GTCATGCAAATGGCTTTCTTCCACCTGACGCATATTCTTCCGGGCGATAGCGCCCTGGTTGAGTTGCAGGGCGCGATTGC CAAAAGCTATAGCAGCAAAGGTCAGGATCTGGTTGAGCGTAACTGGCAGGCATTGGCTCTGGCGCAGGAATCGCTGGCGG AAGTGCCGTTGCAGGCGGTTAATCCGCATAGCGCGCATCGCCCGCCGGTCGTCTCCGACGCCGCGCCGGATTTCGTGAAA ACCGTTACCGCCGCCATGTTGGCGGGCCTCGGCGACGCACTGCCTGTTTCCGCGCTGCCGCCGGACGGAACATGGCCAAT GGGCACCACCCGCTGGGAAAAACGCAATATCGCCGAAGAGATTCCTGTCTGGAAAGAGGAACTGTGTACACAATGTAATC ACTGCGTCGCCGCCTGCCCTCACTCGGCAATTCGTGCAAAAGTCGTTTCCCCGCAGGCGATGGAGAACGCGCCAGCCAGT CTGCATTCGCTGGACGTGAAGTCCCGCGATATGCGCGGCCAGAAATATGTGCTGCAGGTCGCGCCGGAAGACTGTACTGG CTGTAATTTATGCGTAGAGGTCTGCCCGGCTAAAGATCGGCAAAATCCACAGATCAAGGCGATTAACATGATGTCGCGCC TGGAGCATGTGGAAGAAGAGAAAGTGAATTATGACTTTTTCCTCGACTTACCGGAAATCGATCGCAGCAAACTGGAACGA ATTGATATCCGCACATCGCAGCTTATTACGCCGCTGTTTGAATATTCCGGCGCCTGTTCCGGCTGCGGTGAAACGCCGTA TATTAAACTGCTGACTCAGTTATATGGCGACAGAATGTTAATCGCTAACGCCACGGGGTGTTCCTCTATTTACGGCGGTA ACTTACCCTCAACGCCTTATACCACCGATGCCAACGGACGCGGCCCGGCATGGGCGAATTCGTTATTTGAAGATAACGCG GAATTTGGTCTCGGTTTCCGTCTGAGCGTGGATCAGCACCGGGCGCGCGTCATGCGTTTACTGGCGCAATTCGCCGATCG CATTCCGGCGGAATTAAACGATGCGCTGCATGCCGAAGCAACGCCTGACGTTCGGCGTGAGCAGGTCGCCGCATTACGCC AACATCTGAAATCGGTTGCGGGCGCAGAGGAACTGTTAAAGGATGCTGATGCGCTGGTAGAAAAATCAATCTGGCTGATT GGCGGCGATGGTTGGGCATACGACATCGGCTTTGGCGGTTTAGACCATGTGTTAAGCCTGACGGAGAATGTCAATATTCT GGTTCTGGATACGCAGTGTTATTCCAATACTGGCGGCCAGGCGTCGAAGGCGACGCCGCTTGGCGCCGTCACTAAGTTTG GCGAACATGGCAAGCGTAAAGCCCGTAAAGATCTTGGCGTCAGCATGATGATGTATGGTCATGTTTATGTCGCGCAAATT TCGCTGGGCGCGCAGTTAAACCAGACGGTGAAAGCCATCCAGGAGGCCGAAGCCTGGCCAGGACCGTCGCTGATCATTGC CTATAGCCCCTGTGAGGAACATGGTTACGATCTGGCGCTAAGCCATGACCAGATGCGCCAGTTAACGGCGACCGGTTTCT GGCCGTTATACCGCTTTGATCCCCGCCGTGCGGATGAAGGCAAGCCGCCGCTGGCTCTGGACTCTCGGCCACCGTCTGAT GCCCTGGCGGAAACGTTGCTTAATGAACAGCGTTTCCGTCGCCTGAATGCGCAACAGCCTGAAGTAGCTGAACAATTATG GCGAGATGCCGCATTGGATTTGCAAAAACGCTATGACTTTCTTGCCTTGCTGGCAGGAAAAGCGGAAAAACCCGGCGCAG ATTAA Protein sequence : MQTIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSEGGAIAAVHGALQTGSLSTSF TSSQGLLLMIPTLYKLAGQLTPFVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAASVQEAQDFALIAHRATLKSR VPFIHFFDGFRTSHEINKIIPLTDETILNLMPQAEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVE EAMKAFGDATGRHYQPFEYYGHPQAERVIIMMGSALGTCEEVVDELLIRGEKVGVLKVRLFRPFSAKHLLQALPETVRAI AVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRTIGGRYGLSSKEFGPACVLAVFNELSRAKPKPRFTVGIYDDV TNLSLPLPENTLPGSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEKPIRSAYL IAQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVVNAAKIARECGLGARINT VMQMAFFHLTHILPGDSALVELQGAIAKSYSSKGQDLVERNWQALALAQESLAEVPLQAVNPHSAHRPPVVSDAAPDFVK TVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIPVWKEELCTQCNHCVAACPHSAIRAKVVSPQAMENAPAS LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPQIKAINMMSRLEHVEEEKVNYDFFLDLPEIDRSKLER IDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNA EFGLGFRLSVDQHRARVMRLLAQFADRIPAELNDALHAEATPDVRREQVAALRQHLKSVAGAEELLKDADALVEKSIWLI GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMMMYGHVYVAQI SLGAQLNQTVKAIQEAEAWPGPSLIIAYSPCEEHGYDLALSHDQMRQLTATGFWPLYRFDPRRADEGKPPLALDSRPPSD ALAETLLNEQRFRRLNAQQPEVAEQLWRDAALDLQKRYDFLALLAGKAEKPGAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 47 |
