Gene Information

Name : ydcW (SNSL254_A1712)
Accession : YP_002040844.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Unknown
Product : gamma-aminobutyraldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.19
Position : 1683186 - 1684631 bp
Length : 1446 bp
Strand : -
Note : catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation

DNA sequence :
ATGACGATATGGGAAAATGCTATGCAATATCAATTACTGATTAATGGCGTGCTGGTGGACGGCGAGGGAGAAAGGCAGTC
TGTTTATAACCCGGCGACAGGCGAGGTCATACTTGAGATTGCGGAAGCGTCGCCCGCGCAGGTTGACGCCGCAGTGCTGG
CCGCCGATAGCGCGTTTGCCGAATGGGGGCAGACCACACCCAAAGCACGGGCGGAATGTCTGTTAAAACTGGCGGACAGC
ATCGAGCAAAACGTCCTTGAGTTCGCCCGGCTTGAATCGCAAAACTGCGGTAAGCCTTTGCACTGCGTAATCAATGATGA
AATTCCGGCAATCGTGGATGTCTTTCGCTTTTTTGCCGGCGCGGCCCGTTGTTTGAGTGGGCTGGCGGCGGGCGAATATC
TGGAAGGACATACGTCGATGATCCGCCGGGATCCGATTGGCGTGGTTGCCTCTATCGCGCCGTGGAATTATCCGCTCATG
ATGGCGGCCTGGAAGCTGGCGCCAGCGCTGGCGGCAGGTAACTGCGTGGTGATTAAGCCTTCTGAAATCACGCCGCTGAC
GGCGCTTAAACTTGCCGCGCTGGCGAAGGATATCTTTCCGCCGGGGGTGCTCAATGTCCTGTTCGGACGAGGGCAAACTG
TTGGCGATGTATTGACCGGCCATGAAAAAGTACGCATGGTCTCTTTAACCGGTTCTATCGCGACCGGGGAGCATATTCTG
CGCCATACTGCGCCAGCGATAAAACGTACGCATATGGAACTCGGTGGTAAAGCCCCGGTGATTGTTTTTGATGACGCCGA
TCTGGATGCGGTGGCGCAGGGCGTCCGGACTTTTGGTTTCTATAATGCCGGACAGGATTGTACTGCGGCGTGCCGTATAT
ACGCGCAGCGCGGTATCTATGATGCGCTGGTCGAAAAGCTAGGGAACGCGGTGAGCAGCCTGAAAATGGGCGCGCCGGAG
GATGAGTCGACAGAGCTGGGGCCGTTAAGTTCGCTGGCGCACCTGAAGCGCGTCACAGCGGCTGTAGAGGAGGCGAAGGC
CCTCAGCCATATCCGTGTGATTACTGGCGGAAGTCAAACGGAAGGTAAAGGTTACTATTTCGCTCCGACGTTGCTGGCAG
ACGCAAAACAGGAAGATGCCATCGTGCAACGCGAGGTCTTCGGCCCGGTGGTCAGTATAACCGTCTTTGATGATGAAGAT
CAGGTTCTGAGGTGGGCCAACGATTCTCGCTATGGTCTGGCATCCTCCGTCTGGACTCAGGACGTTGGGCGGGCGCACCG
GCTTAGCGCCAGATTGCAGTATGGCTGTACCTGGATTAATACCCATTTCATGTTGGTTAGCGAGATGCCGCATGGAGGGC
AAAAACAGTCGGGATACGGCAAAGATATGTCATTGTATGGTCTGGAAGACTACACCCTTGTCCGTCACATCATGGTTAAG
CATTAA

Protein sequence :
MTIWENAMQYQLLINGVLVDGEGERQSVYNPATGEVILEIAEASPAQVDAAVLAADSAFAEWGQTTPKARAECLLKLADS
IEQNVLEFARLESQNCGKPLHCVINDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPIGVVASIAPWNYPLM
MAAWKLAPALAAGNCVVIKPSEITPLTALKLAALAKDIFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHIL
RHTAPAIKRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFYNAGQDCTAACRIYAQRGIYDALVEKLGNAVSSLKMGAPE
DESTELGPLSSLAHLKRVTAAVEEAKALSHIRVITGGSQTEGKGYYFAPTLLADAKQEDAIVQREVFGPVVSITVFDDED
QVLRWANDSRYGLASSVWTQDVGRAHRLSARLQYGCTWINTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTLVRHIMVK
H

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 4e-144 67