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Name : epaR (SNSL254_A1531) Accession : YP_002040672.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Virulence Product : type III secretion apparatus protein SpaR/YscT/HrcT Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 1499095 - 1499874 bp Length : 780 bp Strand : + Note : identified by match to protein family HMM PF01311; match to protein family HMM TIGR01401 DNA sequence : ATGGCACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGTGGCTTTTATTCGACCATTGAGCCTCTCTTTATTACTTCC CCTATTAAAAAGTGGCAGTTTAGGGTCCGCGATTTTACGTAATGGCGTACTTATGTCACTTACCTTTCCCATATTACCAA TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGCTGGTTAGGGTTAGTCACCGGAGAGGTGATTATT GGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG CGCGACAATGGGTACGATATTCAATTCTACAATAGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAGTTCTTGT GTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAACATTCTGTATGAGTCATATCAATATTTACCACCAGGG CGTACTTTATTATTTGACCGGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGCATCAGCTT CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG TGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTGGTTCTACTGACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC TATTTGGTTGAAAGCGATAAATTTTATATTTATCTAAAAGACTGGTTTCCATCTGTATGA Protein sequence : MAQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGSAILRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII GFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG RTLLFDRQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHH YLVESDKFYIYLKDWFPSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaT | CAA68201.1 | secretion system apparatus, SsaT | Virulence | SPI-2 | Protein | 2e-99 | 99 |
| ssaT | NP_460386.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 3e-99 | 99 |
| ssaT | YP_216429.1 | secretion system apparatus protein SsaT | Virulence | SPI-2 | Protein | 2e-99 | 99 |
| ssaT | NP_456107.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 4e-100 | 99 |
| ssaT | NP_805092.1 | type III secretion protein | Virulence | SPI-2 | Protein | 4e-100 | 99 |
| YPO0272 | YP_002345354.1 | type III secretion apparatus protein | Virulence | Not named | Protein | 2e-45 | 51 |
| escT | AFO66312.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-24 | 41 |
| escT | AFO66402.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| epaR | YP_002040672.1 | type III secretion apparatus protein SpaR/YscT/HrcT | VFG0521 | Protein | 1e-99 | 99 |
