Gene Information

Name : SNSL254_A1519 (SNSL254_A1519)
Accession : YP_002040660.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : type III secretion system apparatus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1489457 - 1489720 bp
Length : 264 bp
Strand : +
Note : identified by match to protein family HMM PF09525; match to protein family HMM TIGR02497

DNA sequence : 
TTGAATATTTCTGATATGAGCGTAGTGCCTGTAAGCACTCAATCTTATGTAAAGTCCTCTGCAGAACCGAGCCAGGAGCA
AATTAATTTTTTTGAACAATTGCTGAAAGATGAAGCATCCACCAGTAACGCCAGTGCTTTATTACCGCAGGTTATGTTGA
CCAGACAAATGGATTATATGCAGTTAACGGTAGGCGTCGATTATCTTGCCAGAATATCAGGCGCAGCATCGCAAGCGCTT
AATAAGCTGGATAACATGGCATGA

Protein sequence : 
MNISDMSVVPVSTQSYVKSSAEPSQEQINFFEQLLKDEASTSNASALLPQVMLTRQMDYMQLTVGVDYLARISGAASQAL
NKLDNMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaI NP_460373.1 type III secretion system apparatus protein Virulence SPI-2 Protein 7e-32 100
ssaI CAA12195.1 SsaI Virulence SPI-2 Protein 5e-32 100
ssaI AAX49622.1 SsaI Virulence SPI-2 Protein 5e-32 100
ssaI YP_216416.1 secretion system apparatus protein SsaI Virulence SPI-2 Protein 6e-31 97
ssaI NP_456120.1 putative pathogenicity island protein Virulence SPI-2 Protein 2e-30 94
ssaI NP_805079.1 pathogenicity island protein Virulence SPI-2 Protein 2e-30 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SNSL254_A1519 YP_002040660.1 type III secretion system apparatus protein VFG0509 Protein 2e-32 100