Gene Information

Name : SNSL254_A1504 (SNSL254_A1504)
Accession : YP_002040645.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 1475608 - 1476246 bp
Length : 639 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00196

DNA sequence : 
ATGAAAGAATATAAGATCTTATTAGTAGACGATCATGAAATCATCATTAACGGCATTATGAATGCCTTATTACCCTGGCC
TCATTTTAAAATTGTAGAGCATGTTAAAAATGGTCTTGAGGTTTATAATGCCTGTTGCGCATACGAACCTGACATACTTA
TCCTTGATCTCAGCTTACCTGGCATCAATGGCCTGGATATCATTCCTCAATTACATCAGCGTTGGTCAGCAATGAATATT
CTGGTTTACACGGCATACCAACAAGAGTATATGACCATTAAAACTTTAGCCGCAGGTGCTAATGGCTATGTTTTAAAAAG
CAGTAGTCAGCAAGTTCTGTTAGCGGCATTGCAAACAGTAGCAGTAAACAAGCGTTACATTGACCCAACGTTGAATCGGG
AAGCTATCCTGGCTGAATTAAACGCTGACACGACCAATCATCAACTGCTTACTTTGCGCGAGCGTCAGGTTCTTAAACTT
ATTGACGAGGGGTATACCAATCATGGGATCAGCGAAAAGCTACATATCAGTATAAAAACCGTCGAAACACACCGGATGAA
TATGATGAGAAAGCTACAGGTTCATAAAGTGACAGAGTTACTTAACTGTGCCCGAAGAATGAGGTTAATAGAGTATTAA

Protein sequence : 
MKEYKILLVDDHEIIINGIMNALLPWPHFKIVEHVKNGLEVYNACCAYEPDILILDLSLPGINGLDIIPQLHQRWSAMNI
LVYTAYQQEYMTIKTLAAGANGYVLKSSSQQVLLAALQTVAVNKRYIDPTLNREAILAELNADTTNHQLLTLRERQVLKL
IDEGYTNHGISEKLHISIKTVETHRMNMMRKLQVHKVTELLNCARRMRLIEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 1e-96 99
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 1e-96 99
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 1e-96 99
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 1e-96 99
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 7e-88 99
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 2e-47 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SNSL254_A1504 YP_002040645.1 hypothetical protein VFG0492 Protein 3e-97 99