Gene Information

Name : SNSL254_A1503 (SNSL254_A1503)
Accession : YP_002040644.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : merR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1474701 - 1475429 bp
Length : 729 bp
Strand : -
Note : identified by match to protein family HMM PF00376

DNA sequence : 
ATGTCGTATTCTATAGGCGAATTTGCCAGACTATGCGGTATCAATGCCGCCACGCTAAGGGCATGGCAGCGACGCTATGG
TTTATTGAAACCGCAGCGTACTGATGGCGGGCATCGCTTATACAGCGATGACGATATTCGACAAGCGCTTAGCATCCTCG
ACTGGGTGAGAAAAGGCGTACCGATAAGCCAGGTCAAACCCTTACTGTCGCGTCCGGTCATTCGCCTGGGCGATAACTGG
ATAACGATCCAGGAGACGATGCTCCAACATCTCCACGAAGGGCGAATTGACGCGCTGCGGCAGTTGATTTATGACTGTGG
CCGGGAATATCCTCGCGCAGAACTGGTGACCCATTTATTGCGTCCGTTGCGCAGCAAAGTGTCCGCGCACCTTCCCGCCG
TGATGACGCTGCGCGAAATACTGGATGGCATCATTATTGCCTACACCTCTTTTTGCCTTGAAGGCGACAGAAAAGCGCCT
GGCAACAATGCCTTTATTAGCGGATGGAATCTCTCGGATCACTGTGAAATCTGGCTGGAAGCGTTGACTCGTACCGGACA
AGAGCTGCGGCTCAATGTGCTTCCCTCTCCCCCAGTCGTGCTGGCGCCCGAGCTGTTCGCCCAGAGAAAATGGTTCCTGG
TGACCACCGGAAAGCTCACTGCCGGGCAGAAAAAACAGCTTGCCCAGTGGCGCAACGTGGTCGCTTCGCTGGAGGTTATC
ACACTATAG

Protein sequence : 
MSYSIGEFARLCGINAATLRAWQRRYGLLKPQRTDGGHRLYSDDDIRQALSILDWVRKGVPISQVKPLLSRPVIRLGDNW
ITIQETMLQHLHEGRIDALRQLIYDCGREYPRAELVTHLLRPLRSKVSAHLPAVMTLREILDGIIIAYTSFCLEGDRKAP
GNNAFISGWNLSDHCEIWLEALTRTGQELRLNVLPSPPVVLAPELFAQRKWFLVTTGKLTAGQKKQLAQWRNVVASLEVI
TL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 5e-111 99
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 5e-111 99
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 3e-111 99
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 2e-111 99
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 7e-110 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SNSL254_A1503 YP_002040644.1 merR family transcriptional regulator VFG0491 Protein 1e-111 99