Gene Information

Name : SNSL254_A1500 (SNSL254_A1500)
Accession : YP_002040641.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 1472499 - 1473137 bp
Length : 639 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281

DNA sequence : 
ATGAAAATGGGGGCAGGGATGGCGACAATTCATCTACTGGATGATGATACGGCGGTCACTAACGCGTGCGCGTTTTTACT
GGAAAGTCTGGGATATGACGTAAAATGCTGGACGCAGGGGGCGGATTTTTTGGCGCAGGCCAGTCTGTATCAGGCCGGGG
TCGTATTACTGGATATGCGAATGCCGGTACTGGATGGGCAGGGCGTTCATGATGCGTTGCGCCAGTGCGGAAGTACCCTG
GCGGTTGTTTTTCTTACCGGGCATGGCGATGTACCGATGGCCGTGGAGCAGATGAAACGCGGCGCCGTCGATTTTCTGCA
AAAACCGGTATCGGTAAAACCGCTACAGGCGGCGCTGGAGCGTGCGCTGACGGTTTCATCGGCAGCGGTGGCGCGTCGTG
AGATTATACTGTGTTACCAGCAGTTGACGCCGAAAGAGCGTGAGCTGGCCAGCCTGGTGGCAAAAGGATTTATGAACCGT
GAAATTGCGGAAGCGATGAATATCGCGGTGCGTACCGTAGAGGTGCACCGCGCCAGAGTCATGGAAAAAATGCAGGCCGG
TAGCCTGGCGGAACTGATCAGGCGTTTCGAAAAAATGGCCTCGCCAGAGACCAGAATACGAACAACGTATGAGCCATGA

Protein sequence : 
MKMGAGMATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTL
AVVFLTGHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVARREIILCYQQLTPKERELASLVAKGFMNR
EIAEAMNIAVRTVEVHRARVMEKMQAGSLAELIRRFEKMASPETRIRTTYEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 8e-95 100
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 8e-95 100
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 8e-95 100
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 4e-98 100
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 5e-95 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SNSL254_A1500 YP_002040641.1 response regulator VFG0488 Protein 1e-98 100