Gene Information

Name : SNSL254_A1499 (SNSL254_A1499)
Accession : YP_002040640.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : sensor-kinase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4191
EC number : -
Position : 1470794 - 1472542 bp
Length : 1749 bp
Strand : +
Note : identified by match to protein family HMM PF00512; match to protein family HMM PF02518

DNA sequence :
GTGTTGGCGGCAGTAGGGCTACTTTGTCATGGCGCGTGGGCAGGGACGTGGAATATCGGTATTTTGGCCATGCGCGGCGA
GGCGTCTACGCGTAGCCACTGGCAACCCTTGGCAAAGACATTAAGCCAACAGCTTCCAGGCGAAACCTTTCACATCCAGC
CGCTGGATCTGCATCAAATGCAGGAGGCTGTTAACCAGGGAACCGTGCAGTTTGTGATAACCAACCCGGCGCAATTTGTC
CAACTGAACAGCCATGCGCCGCTGCGCTGGTTAGCTTCCCTGCGCTCCACGCGCGATGGGAAAGCAGTGAGTAATGTTAT
TGGCAGCGTGATTTTGACCCGACGCGATAGCGGCATCACCACGGCGCATGATCTCATCGGTAAGACCGTCGGCGCGATTG
ATGCTCAGGCGTTTGGCGGCTATTTATTAGGCTATAAAGCGCTCAGCGACGCGGGCTTACGCCCGGAGCGCGATTTTCAT
CTCCGTTTTACCGGATTTCCTGGCGATGCCTTAGTCTATATGCTGCGCGAAAAAGCGGTGCAGGCGGCAATTGTGCCAGT
GTGCCTGTTAGAAAATATGGATCAGGAAGGATTGATTAATAAAAAGGACTTTATCGCGCTGCTTTCCCGACCGACGCCCC
TGCCTTGCTTAACCAGTACGCCGTTATATCCTGACTGGTCGTTCGCGGCGCTACCTGCGGTAAGCGATGCGCTGGCGGAT
CGCGTAACGCGAGCGCTATTCAACGCGCCCGCCGCCGCGTCATTTCACTGGGGCGCGCCTGCGTCCACCAGTCAGGTGGA
AGCCTTGCTGCGTGATGTTCGTCAGCACCCTCAGCAGCGTCGACTGTGGCTGGATGTCAAAAGTTGGTTAATCCAGCACC
AGCTAATGGTCGGCGGCGTGATTCTGGCGTTCCTGTTGCTCACGCTCAATTATATTTGGGTCATGCTGCTGGTGCGTCGA
CGTGGAAAGCAACTGGAACGTAATAGCGTAGTTCTTCATCAGCATGAGCGGGCGCTGGAAACCGCCCGGCAAATGAGCGT
GTTGGGTGAAATGACCTCCGGGTTTGCCCATGAGCTTAATCAGCCGCTTTCCGCGATTCGACATTATGCCCAGGGGTGCC
TGATTCGACTGCGCGCTGCAGATGAACAGCATCCCTTGCTGCCAGCGCTGGAGCAGATTGACCAGCAGGCGCAACGCGGT
GCGGATACTCTGCGTAACCTGCGTCACTGGGTCAGCCAGGCGCAGGGCAACCCGGTGCTAACCGAAGCGTGGAAGGCCAT
AGCCATTCGGGAGGCGATTGATCATGTCTGGCAATTGTTGCGTATGGCGCAACAGTTTCCGACAGTGACTCTGCATACCG
AGGTTAGCGCTGCGCTGCGCGTAACTCTGCCGTCAGTGCTGCTGGAACAGGTGCTGGCGAATATCATTCTTAATGCGGCT
CAGGCGGGCGCCACCCATTTATGGGTCGTTGCTGAACGCACTGAAAACGGCATCAGTATCGCTTTACAGGATAACGCCGG
GGGAATCGATGAGGCGCTATTACGTCAGGCGTTTCAGCCGTTTATGACCACCCGCAAAGAGGGGATGGGCTTAGGGCTGG
CGATTTGCCAGCGGCTGGTGCGGTATGGGCGGGGCGATATCAGTATCAGGAACCAGACCGCGCCGGACGGTCTGTCGGGA
ACGGTGGTCACGATACATTTCTTACATGAAAATGGGGGCAGGGATGGCGACAATTCATCTACTGGATGA

Protein sequence :
MLAAVGLLCHGAWAGTWNIGILAMRGEASTRSHWQPLAKTLSQQLPGETFHIQPLDLHQMQEAVNQGTVQFVITNPAQFV
QLNSHAPLRWLASLRSTRDGKAVSNVIGSVILTRRDSGITTAHDLIGKTVGAIDAQAFGGYLLGYKALSDAGLRPERDFH
LRFTGFPGDALVYMLREKAVQAAIVPVCLLENMDQEGLINKKDFIALLSRPTPLPCLTSTPLYPDWSFAALPAVSDALAD
RVTRALFNAPAAASFHWGAPASTSQVEALLRDVRQHPQQRRLWLDVKSWLIQHQLMVGGVILAFLLLTLNYIWVMLLVRR
RGKQLERNSVVLHQHERALETARQMSVLGEMTSGFAHELNQPLSAIRHYAQGCLIRLRAADEQHPLLPALEQIDQQAQRG
ADTLRNLRHWVSQAQGNPVLTEAWKAIAIREAIDHVWQLLRMAQQFPTVTLHTEVSAALRVTLPSVLLEQVLANIILNAA
QAGATHLWVVAERTENGISIALQDNAGGIDEALLRQAFQPFMTTRKEGMGLGLAICQRLVRYGRGDISIRNQTAPDGLSG
TVVTIHFLHENGGRDGDNSSTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrS CAB37413.1 TtrS Virulence SPI-2 Protein 0.0 99
ttrS NP_805057.1 hypothetical protein Virulence SPI-2 Protein 0.0 99
ttrS YP_216394.1 tetrathionate reductase complex: sensory transduction histidine kinase Virulence SPI-2 Protein 0.0 99
ttrS NP_460351.1 sensory histidine kinase Virulence SPI-2 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SNSL254_A1499 YP_002040640.1 sensor-kinase VFG0487 Protein 0.0 99