Gene Information

Name : SNSL254_A1497 (SNSL254_A1497)
Accession : YP_002040638.1
Strain : Salmonella enterica SL254
Genome accession: NC_011080
Putative virulence/resistance : Virulence
Product : tetrathionate reductase complex subunit C
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG3301
EC number : -
Position : 1468825 - 1469847 bp
Length : 1023 bp
Strand : -
Note : identified by match to protein family HMM PF03916

DNA sequence :
ATGACGCATTCACTCATCATTGAAGAAGTGCTGGCTCACCCGCAGGACATTAGCTGGCTGCCGTGGGCGGTACAATATTT
CTTTTTTATTGGCATTGCCGCCTGCGCCGCACTGTTTGCCTGTTATCTTCACTGGCGGAAAAAAGACGCCGCAACAGAAG
AAAATCGGGCATTACTGATTGCCATTACCTGTGCGATTACCGCACCGCTGGCGCTGACGGCGGATCTGCACCAGACCGCC
CGCGTCTGGCATTTCTATGCCTGGCCGACGCCCTGGTCGTGGATGCCCTGGGGAGCATTATTTCTGCCGCTGTTTACCGG
CTTTCTCGCCCTATGGTTCCTGGCGCAGCAAATAAAACGATTATTCAATAAAAGTTACAACGTCACAAAATGGTTGGCGT
TAGCCAGCGCGCTTTGCGCGGTGGGCCTGTTGATTTATACCGGCCGCGAAGTCTCCGTTGTGCTGGCGCGCCCAATCTGG
TTTAGCTACGCCTTCCCCGTGGCGATGTTTCTTAGCGCCTTACAGGCGTTCTTCGCGCTGATGATTGTCGCCGCCCGACG
CGACTCGGTAAGGCTGCCAAAAATATTGTGGGGACAAATCTGGACGCTCGCGGCGCTGGGGCTGGTTGTGGCCATGTGGG
TTAGCGGCGATACGCTTTCCGGCACGGCAATCCGTCAGTGGATTACCGTCGCCCTGTCAGCCAAATATTACGCTGTCGGC
TGGGTAGCGCTGTGGGTATTCACGCTGCTGTTCTGTAGCCTGACGCTACGTCATCCGTTATCGCAGCTAAGACGCGTCCT
GCTGGTTCTCAGCGCGCTGGCGCTATGTTGGCTGATGCGCTGGACATTGTTGATTCAGGTACAAACCGTCCCCAAGTTCA
ACGCGCAATTTAACCCTTACTCGTTACCAGGCGGAACGGATGGCTGGCTGGCTATTCTCGGCACCTTCGGCCTGTGGATA
GCGCTACTGATTATTATTCGTGAAACGCTGAACGGACTCACCAGGAGATTACAACATGGCTAA

Protein sequence :
MTHSLIIEEVLAHPQDISWLPWAVQYFFFIGIAACAALFACYLHWRKKDAATEENRALLIAITCAITAPLALTADLHQTA
RVWHFYAWPTPWSWMPWGALFLPLFTGFLALWFLAQQIKRLFNKSYNVTKWLALASALCAVGLLIYTGREVSVVLARPIW
FSYAFPVAMFLSALQAFFALMIVAARRDSVRLPKILWGQIWTLAALGLVVAMWVSGDTLSGTAIRQWITVALSAKYYAVG
WVALWVFTLLFCSLTLRHPLSQLRRVLLVLSALALCWLMRWTLLIQVQTVPKFNAQFNPYSLPGGTDGWLAILGTFGLWI
ALLIIIRETLNGLTRRLQHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrC NP_460349.1 tetrathionate reductase complex subunit C Virulence SPI-2 Protein 4e-133 99
ttrC NP_456143.1 tetrathionate reductase subunit C (membrane protein) Virulence SPI-2 Protein 3e-133 99
ttrC NP_805055.1 tetrathionate reductase subunit C Virulence SPI-2 Protein 3e-133 99
ttrC YP_216392.1 tetrathionate reductase complex subunit C Virulence SPI-2 Protein 1e-133 99
ttrC CAB37415.1 tetrathionate reductase subunit C (TtrC) Virulence SPI-2 Protein 3e-133 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SNSL254_A1497 YP_002040638.1 tetrathionate reductase complex subunit C VFG0485 Protein 2e-133 99