|
Name : SNSL254_A1496 (SNSL254_A1496) Accession : YP_002040637.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Virulence Product : tetrathionate reductase complex subunit A Function : - COG functional category : C : Energy production and conversion COG ID : COG0243 EC number : - Position : 1465770 - 1468832 bp Length : 3063 bp Strand : - Note : identified by match to protein family HMM PF01568; match to protein family HMM PF04879 DNA sequence : ATGGCTAATTTAACCCGTCGTCAGTGGCTAAAAGTCGGTCTCGCCGTCGGTGGGATGGTCACTTTTGGTCTGAGCTACCG TGATGTGGCGAAACGCGCAATTGATGGCCTGTTAAACGGGACGTCCGGCAAGGTAACGCGCGACCGCATCTTTGGCAACG CGTTAATTCCGGAGGCGCAGGCGCAAACACACTGGCAGCAAAATCCACAACAAACCATAGCCATGACGCAATGCTTCGGC TGTTGGACACAGTGCGGTATCCGCGCCCGGGTTAATGCCGATGGCAAAGTGATACGCATCGCCGGCAATCCCTATCACCC CTTGTCGCAGGAACACCCGATTGACTCGTCCGTCCCTTTTAGCGAAGCCATGGAGCAACTGGCGGGAGAAAGCGGTCTTG ACGCCCGCTCAACCGCCTGCGCGCGCGGCGCCACGCTGCTGGAAAGCCTGTACAGTCCGCTACGACTGCTTGAACCGATG AAACGCGTGGGTAAACGCGGCGAAGGGAAATGGCAGCGCATCAGCTTTGAGCAACTTATTGAAGAAGTCGTGGAAGGCGG CGATCTGTTTGGCGAAGGTCATGTGGACGGACTGCGCGCTATTCATGCGCCGGATACGCCAATTGACGCAAAGCACCCCA GTTTCGGGCCCAAAACCAATCAGTTACTGGTCACGAATACCAGCGACGAAGGCCGCGATGCGTTTCTGCGTCGTTTTGCG CTAAATAGCTTCGGCAGCAAGAATTTCGGCGCGCATGGCGCCTACTGTGGACTGGCTTACCGGGCCGGCTCCGGGGCATT GATGGGCGATCTGGATAAAAACCCGCATGTCAAACCCGACTGGGAAAACGTGGAGTTTGCGCTCTTTATGGGCACCTCCC CGGCACAGTCCGGCAATCCGTTTAAACGCCAGGCACGTCAGTTGGCGAGCGCCCGACTGCGTGAGAATTTTCAATACGTC GTGGTCGCCCCCGCCCTCCCCTTATCAACGGTGCTCGCCGATCCTCGCGGTCGCTGGCAACCGGTCATGCCCGGCAGTGA TTCGGCGCTGGCAATGGGGATGATCCGCTGGATCATGGATAATCAACGTTATAATGCTGATTATCTGGCGATTCCCGGCG TACAGGCGATGCAGCAGGCCGGCGAGCAAAGTTGGACCAACGCCACGCACCTGGTCATTGCGGATGAACTGCCGACGCTT GCCGGACAACACCTGACGCTGCGCCATCTTACGCCCGATGGCGAAGAGACCCCTGTCGTGCTGAATACCGACGGCGAGTT GGTCGATGCGTCCACTTGCCGACAGGCACGGCTTTTCGTGACGCAGTTCGTTACGCTCGCCGACGGCCAACGGGTCACGG TGAAGAGCGGGTTGCAACGCCTGAAAGAGGCGGCAGAAAAGCTCTCGTTGGCGCAATACAGCGAACAGTGCGGCGTGCCG GAAGCGCAAATTATCGCGCTGGCGGAAACCTTTACCGCTCACGGACGTAAAGCCGCAGTCATCAGTCACGGCGGCATGAT GGCCGGCAATGGGTTTTATAACGCCTGGTCGGTCATGATGCTTAACGCGCTGATCGGCAACCTCAGCTTGTCCGGCGGCG TCTTTGTCGGCGGCGGCAAATTCAACGGCGTTAGCGACGGCCCCCGCTACAACATGAACAGTTTTGCCGGAAAAGTGAAA CCGTCCGGGTTAAGTATTGCCCGTAGCAAAACCGCTTATGAAGCATCGGAAGAATACCGCGACAAAATTGCCGGTGGGCA ATCCCCTTATCCAGCCAAAGCGCCGTGGTATCCCTTTGTGGCAGGCCAGCTTACCGAACTGTTGACCTCCGCGCTCGAAG GCTATCCTTATCCGCTTAAAGCCTGGATTTCCAATATGAGCAACCCGTTTTACGGTGTTCCCGGTCTACGCGCCGTGGCG GAAGAAAAACTAAAAGACCCTCGCCGACTGCCGCTCTTTATCGCGATTGACGCCTTTATGAATGAAACGACGGCGCTGGC GGATTACATTGTGCCGGATACGCACAATTTTGAGAGCTGGGGCTTTACGGCGCCCTGGGGCGGCGTAGCCAGTAAAGCCA CTACCGCCCGCTGGCCGGTTGTCGCCCCCGCCACTCACCGCACGGCGGACGGGCAACCTGTCTCAATGGAAGCATTTTGT ATTGCGGTAGCAAAACGGCTCCATCTGCCCGGCTTCGGCGACCGGGCGATAACCGATCCGCAGGGCAATACTTTTCCACT GAACCGGGCGGAAGACTTCTATCTGCGCGTAGCCGCTAATATCGCCTTTATGGGCAAGACGCCGGTCGCGCTGGCAAATC AGGAAGATATTTCGCTTACCGGCGTCAGCCGCATTCTGCCAGCAATTCAGCACACGCTTAAAGCTGATGAGGTCGGTCGC GTGGCGTTTATCTACTCGCGTGGCGGCCGGTTTGCGCCCGAGGATAGCGGCTATACGGAGCAACGGTTAGGTAACGCGTG GAAAAAACCCTTACAGATCTGGAATGCAGATGTCGCCGCCCACCGTCACGCCATCACCGGGGAGCGCTTCAGCGGTTGCC CGGTCTGGTATCCGGCGCGTTTGTCAGATGGTCGTGCGATTGACGACCAGTTTCCCATTGGGCAATGGCCGCTGAAACTG ATTTCATTTAAATCAAATACCATGTCCAGCTCAACAGCCGTCATCCCGCGCTTACACCATGTGAAGCCAGCAAACCTGGT GGCGCTGAATCCGCAAGACGGCGAGCGTTATGGACTGCAACATGGCGATCGGGTACGGATCATTACGCCGGGCGGTCAGG TCGTGGCGCAAATCAGTTTGTTAAATGGCGTGATGCCAGGCGTCATCGCCATCGAACACGGATATGGCCACCGCGAGATG GGCGCAACGCAGCACTCTCTGGATGGCGTGCCTATGCCGTATGATCCACAAATCAGGGCAGGCATAAATCTTAACGATCT GGGCTTTGCCGATCCGACAAGAACCATTACCAACACCTGGCTCGACTGGGTTTCTGGCGCGGCAGTACGTCAGGGGCTGC CGGCAAAAATCGAGCGTATATAA Protein sequence : MANLTRRQWLKVGLAVGGMVTFGLSYRDVAKRAIDGLLNGTSGKVTRDRIFGNALIPEAQAQTHWQQNPQQTIAMTQCFG CWTQCGIRARVNADGKVIRIAGNPYHPLSQEHPIDSSVPFSEAMEQLAGESGLDARSTACARGATLLESLYSPLRLLEPM KRVGKRGEGKWQRISFEQLIEEVVEGGDLFGEGHVDGLRAIHAPDTPIDAKHPSFGPKTNQLLVTNTSDEGRDAFLRRFA LNSFGSKNFGAHGAYCGLAYRAGSGALMGDLDKNPHVKPDWENVEFALFMGTSPAQSGNPFKRQARQLASARLRENFQYV VVAPALPLSTVLADPRGRWQPVMPGSDSALAMGMIRWIMDNQRYNADYLAIPGVQAMQQAGEQSWTNATHLVIADELPTL AGQHLTLRHLTPDGEETPVVLNTDGELVDASTCRQARLFVTQFVTLADGQRVTVKSGLQRLKEAAEKLSLAQYSEQCGVP EAQIIALAETFTAHGRKAAVISHGGMMAGNGFYNAWSVMMLNALIGNLSLSGGVFVGGGKFNGVSDGPRYNMNSFAGKVK PSGLSIARSKTAYEASEEYRDKIAGGQSPYPAKAPWYPFVAGQLTELLTSALEGYPYPLKAWISNMSNPFYGVPGLRAVA EEKLKDPRRLPLFIAIDAFMNETTALADYIVPDTHNFESWGFTAPWGGVASKATTARWPVVAPATHRTADGQPVSMEAFC IAVAKRLHLPGFGDRAITDPQGNTFPLNRAEDFYLRVAANIAFMGKTPVALANQEDISLTGVSRILPAIQHTLKADEVGR VAFIYSRGGRFAPEDSGYTEQRLGNAWKKPLQIWNADVAAHRHAITGERFSGCPVWYPARLSDGRAIDDQFPIGQWPLKL ISFKSNTMSSSTAVIPRLHHVKPANLVALNPQDGERYGLQHGDRVRIITPGGQVVAQISLLNGVMPGVIAIEHGYGHREM GATQHSLDGVPMPYDPQIRAGINLNDLGFADPTRTITNTWLDWVSGAAVRQGLPAKIERI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ttrA | YP_216391.1 | tetrathionate reductase complex subunit A | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ttrA | NP_456144.1 | tetrathionate reductase subunit A | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ttrA | NP_805054.1 | tetrathionate reductase subunit A | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ttrA | NP_460348.1 | tetrathionate reductase complex subunit A | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ttrA | CAB37416.1 | tetrathionate reductase subunit A (TtrA) | Virulence | SPI-2 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SNSL254_A1496 | YP_002040637.1 | tetrathionate reductase complex subunit A | VFG0484 | Protein | 0.0 | 99 |
