Gene Information

Name : psaB (SPG_1558)
Accession : YP_002038263.1
Strain : Streptococcus pneumoniae G54
Genome accession: NC_011072
Putative virulence/resistance : Resistance
Product : manganese ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1498090 - 1498812 bp
Length : 723 bp
Strand : +
Note : Dintilhac A, Mol Microbiol. 1997 Aug;25(4):727-39.; identified by match to protein family HMM PF00005

DNA sequence :
ATGATACGTATCGAAAACCTCAGTGTCTCCTACAAAGAAACGTTGGCACTTAAGGATATTTCACTAGTGCTCCATGGACC
AACAATTACCGGCATCATTGGTCCAAACGGCGCTGGGAAATCAACACTATTAAAAGGTATGCTGGGAATTATCCCACATC
AAGGTCAGGCATTTCTCGATGACAAGGAAGTTAAAAAATCCTTACACCGAATTGCCTATGTCGAACAAAAAATCAATATC
GACTACAACTTTCCCATCAAGGTCAAGGAATGCGTCTCGTTAGGACTATTTCCCTCTATTCCTCTCTTTCGAAGTTTAAA
GGCTAAACATTGGAAGAAAGTGCAAGAGGCCCTTGAAATCGTCGGCCTAGCTGACTACGCTGAACGTCAAATTAGTCAAC
TGTCTGGAGGTCAATTCCAGCGGGTCTTGATTGCCAGATGTTTGGTGCAGGAAGCCGACTATATCCTCTTGGATGAACCC
TTTGCTGGGATTGACTCTGTCAGTGAGGAAATCATCATGAATACGCTGAGAGATTTGAAAAAAGCTGGGAAGACGGTTCT
CATCGTTCACCACGACCTCAGCAAGATTCCCCACTACTTCGATCAAGTCTTACTTGTCAATCGAGAAGTGATTGCCTTTG
GTCCAACAAAAGAAACTTTTACCGAAACCAATCTAAAAGAAGCTTACGGTAATCAACTCTTTTTCAATGGAGGTGACCTA
TGA

Protein sequence :
MIRIENLSVSYKETLALKDISLVLHGPTITGIIGPNGAGKSTLLKGMLGIIPHQGQAFLDDKEVKKSLHRIAYVEQKINI
DYNFPIKVKECVSLGLFPSIPLFRSLKAKHWKKVQEALEIVGLADYAERQISQLSGGQFQRVLIARCLVQEADYILLDEP
FAGIDSVSEEIIMNTLRDLKKAGKTVLIVHHDLSKIPHYFDQVLLVNREVIAFGPTKETFTETNLKEAYGNQLFFNGGDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-67 57
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 9e-68 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
psaB YP_002038263.1 manganese ABC transporter ATP-binding protein BAC0400 Protein 5e-39 42