Gene Information

Name : Smal_0919 (Smal_0919)
Accession : YP_002027307.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1064136 - 1064819 bp
Length : 684 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psb:Psyr_3127 response regulator receiver:transcriptional regulatory protein, C-terminal

DNA sequence : 
ATGCCGCGCGTACTCACCATCGAGGACGATCTTGTCACCGCCGAGGAGATCGCCACCGAACTGCGCAGCCACGGCTTCGA
CGTGGACCTGGCCAGCGACGGCAGCAACGGCCTGGCGCTGGCACGTGCAGGCGACTACGCGGTGATCACCCTGGACCGCA
TGCTGCCCGGCATCGACGGGCTGGCCCTGGTCACCACGCTGCGCCGTGAAGGCATCACCACGCCGGTGCTGATGATCAGC
GCACTGTCGGACGTGGATGAACGCGTGCGTGGCCTGCGCGCCGGCGGCGACGACTACCTGACCAAGCCCTTCGCTTCGGA
CGAGATGGCTGCACGCGTGGAAGTGCTGATCCGGCGTCAGGGCCCGACTGGCGCCATCGACAACGTGCTGCGTGCCGGCG
ACCTGGAACTGGACCTGATGACCCGTTCGGCGCGACGCGGCGGGGATGAAATCGCGCTGCTGCCGACCGAGTTCAAGTTG
CTCGAATTCCTGGTCCGCAACGCCGGCCAGGTGGTCACCCGCAGCATGCTGTTCCAGGAAGTCTGGGGCTACCACTTCGA
TCCGGGTACCAACCTGATCGACGTGCATATCGGTCGCGTGCGCAAACGCATCGAACAACCCGGCCGGCCGCAGCCGATCA
TGACCGTCCGTGGAACCGGCTATGTCTTCGACGCGCAATCCTGA

Protein sequence : 
MPRVLTIEDDLVTAEEIATELRSHGFDVDLASDGSNGLALARAGDYAVITLDRMLPGIDGLALVTTLRREGITTPVLMIS
ALSDVDERVRGLRAGGDDYLTKPFASDEMAARVEVLIRRQGPTGAIDNVLRAGDLELDLMTRSARRGGDEIALLPTEFKL
LEFLVRNAGQVVTRSMLFQEVWGYHFDPGTNLIDVHIGRVRKRIEQPGRPQPIMTVRGTGYVFDAQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_0919 YP_002027307.1 winged helix family two component transcriptional regulator BAC0125 Protein 4e-41 44
Smal_0919 YP_002027307.1 winged helix family two component transcriptional regulator BAC0111 Protein 3e-44 43
Smal_0919 YP_002027307.1 winged helix family two component transcriptional regulator BAC0197 Protein 2e-37 42
Smal_0919 YP_002027307.1 winged helix family two component transcriptional regulator BAC0347 Protein 9e-41 42
Smal_0919 YP_002027307.1 winged helix family two component transcriptional regulator BAC0083 Protein 2e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_0919 YP_002027307.1 winged helix family two component transcriptional regulator VFG1389 Protein 4e-34 43
Smal_0919 YP_002027307.1 winged helix family two component transcriptional regulator VFG1390 Protein 3e-38 42
Smal_0919 YP_002027307.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-35 41