Gene Information

Name : Smal_0489 (Smal_0489)
Accession : YP_002026877.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.1
Position : 573840 - 575012 bp
Length : 1173 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: xcb:XC_3635 cystathionine gamma-lyase-like protein

DNA sequence : 
ATGTCCAACGCTACTTCCCAGGATCGTGCCCTGGCCCTGGCTACCCTGGCCATCCACGGTGGCCAGTCGCCGGACCCCAG
TACCGGTGCGGTGATGCCGCCGATCTACGCTACCTCGACCTATGCGCAGTCCAGCCCGGGTGAGCACCAGGGCTTCGAGT
ATTCGCGTACCCACAACCCGACGCGCTTCGCCTACGAGCGCTGTGTGGCCTCGCTGGAAGGCGGTACCCGTGGCTTCGCC
TTCGCTTCGGGCATGGCCGCCAGCTCGACCGTGATCGAGCTGCTGGACGCCGGCAGCCATGTGGTGGCGATGGATGACAT
CTATGGCGGCAGCTTCCGCCTGTTCGAGCGTGTGCGTCGCCGTACCGCCGGGCTGGACTTCAGCTTCGTCGATCTGACCG
ATCTGGCGGCGTTTGAAGCCTCCATCACGCCGAAGACGAAGATGGTCTGGATCGAGACCCCGACCAACCCGATGCTGAAG
ATCGTCGACATCGCTGCGGTCGCCGCCATCGCCAAGCGCCATGGCCTGATCGTAGTGGTCGACAACACCTTCGCCTCGCC
GATGCTGCAGCGTCCGCTGGAGCTGGGCGCGGACCTGGTCCTGCATTCGGCCACCAAGTACCTCAATGGCCACTCGGACA
TGGTCGGCGGCATGGTCGTGGTCGGTGACAACGCCGAACTGGCCGAGCAGATGGCCTTCCTGCAGAACTCGGTGGGTGGC
GTGCAGGGCCCGTTCGACAGCTTCCTGGCCCTGCGTGGCCTGAAGACCCTGCCGCTGCGCATGAAGGCGCATTGCGCCAA
CGCGCTGGCCCTGGCCCAGTGGCTGGAAAAGCATCCGGCGGTGGAGAAGGTGATCTACCCGGGCCTGGCCTCGCACCCGC
AACATGAGCTGGCGGGCAAGCAGATGGCTGGCTACGGCGGCATCGTTTCGATCGTGCTCAAGGGCGGTTTCGATGCGGCC
AAGCGCTTCTGCGAGAAGACCGAACTGTTCACCCTTGCCGAATCGCTGGGCGGCGTGGAAAGCCTGGTCAACCACCCGGC
GGTGATGACGCATGCGTCGATTCCGGTGGCGCGTCGTGAGCAGCTGGGCATCAGCGATGCGCTGGTGCGGCTGAGTGTGG
GTGTTGAGGATCTGGGGGATCTGCAGGTGGATCTGGGAGAGGCTTTGAAGTGA

Protein sequence : 
MSNATSQDRALALATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNPTRFAYERCVASLEGGTRGFA
FASGMAASSTVIELLDAGSHVVAMDDIYGGSFRLFERVRRRTAGLDFSFVDLTDLAAFEASITPKTKMVWIETPTNPMLK
IVDIAAVAAIAKRHGLIVVVDNTFASPMLQRPLELGADLVLHSATKYLNGHSDMVGGMVVVGDNAELAEQMAFLQNSVGG
VQGPFDSFLALRGLKTLPLRMKAHCANALALAQWLEKHPAVEKVIYPGLASHPQHELAGKQMAGYGGIVSIVLKGGFDAA
KRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGVEDLGDLQVDLGEALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-73 51
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-71 51
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-48 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_0489 YP_002026877.1 cystathionine gamma-lyase BAC0207 Protein 4e-60 47