Gene Information

Name : Smal_0473 (Smal_0473)
Accession : YP_002026861.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 553375 - 554064 bp
Length : 690 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cvi:CV_0761 probable two-component response regulator

DNA sequence : 
ATGCTGGATATCGTACTGGTCGAAGACGATGCCCGCCTCGGTACGATGGTCAGCGACTATCTGCAGCGGCATGGCTACCA
GGTCGCCCACGAGCGCAGTGGCGAACGCGCGGTGGCCCGGATCCTGGCCGAAAAGCCCGCCCTGGTCCTGCTGGATGTCG
GCCTGCCCGACCAGGATGGTTTCGAAGTGTGTCGGCAGATCAGACCCCACTATGACGGCATCATCTGCGTGCTGACCGCG
CGTACCGACAACATCGACCAGGTGCTGGGACTGGAACTGGGCGCCGACGACTACATCGGCAAACCGATCGAGCCCCGGGT
GCTGCTGGCGCGCCTGCGTGCCCATCTGCGCCGCCACCGCCGGGTCGAGCCGCGTGACGGCAGCCTGCGCTTCGGCGAGC
TGAACATCGACCCGTCCACCCGTAACGTGCACCTGCAGGGCAGCCTGCTGGAGCTGACCACCGCCGAGTTCGACCTGCTG
TTCCTGCTGGCCAGCAACGCCGGGCAGATCCTCGACCGCGATGCGCTGCTGCGCGGCCTGCGCGGGATCGCGTTTGATGG
CCTCGACCGCTCGATCGATGCACGCATTTCGCGCCTGCGCCGCAAGCTGGGCGACAACCCGGAACAGCCGGAACGGATCA
AGACCGTCCGCGGCCGCGGCTACCTGTTCAGCCGCTCGGCATGGGGATGA

Protein sequence : 
MLDIVLVEDDARLGTMVSDYLQRHGYQVAHERSGERAVARILAEKPALVLLDVGLPDQDGFEVCRQIRPHYDGIICVLTA
RTDNIDQVLGLELGADDYIGKPIEPRVLLARLRAHLRRHRRVEPRDGSLRFGELNIDPSTRNVHLQGSLLELTTAEFDLL
FLLASNAGQILDRDALLRGLRGIAFDGLDRSIDARISRLRRKLGDNPEQPERIKTVRGRGYLFSRSAWG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-16 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_0473 YP_002026861.1 winged helix family two component transcriptional regulator CP000675.2.gene1535. Protein 1e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_0473 YP_002026861.1 winged helix family two component transcriptional regulator VFG0596 Protein 7e-17 41