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Name : Smal_3550 (Smal_3550) Accession : YP_002029932.1 Strain : Stenotrophomonas maltophilia R551-3 Genome accession: NC_011071 Putative virulence/resistance : Resistance Product : Bcr/CflA subfamily drug resistance transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 3993458 - 3994645 bp Length : 1188 bp Strand : - Note : TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bcm:Bcenmc03_3862 drug resistance transporter, Bcr/CflA subfamily DNA sequence : ATGTTCAATCGACAGGCCCCACGTTGGGCCCATTCCCTGGCGTCGGCCATCGTGCTGATGGCCCCCTTCGATCTCCTGGC CTCGCTGGCCATGGATATCTACCTGCCTGTGGTTCCTGCAATGCCACGCGCGCTGGGCACCTCGCCGGTGCTGGTGCAGC TGACGCTCAGTGCCTACCTGCTGGTGCTCGGCGTGGGCCAGCTGGTGTTCGGCCCACTGTCCGACCGCATCGGGCGGCGG CCGGTGCTGTTGCTGGGCGCGTTGCTGTTCACCGTCGCGTCGATAGCGCTGGCGGCGTCCGGCAGCGGTGCGGCGTTCCT GGCCTGGCGTACCGTGCAGGCGATCGGTGCATCGGCGGCGCTGGTGGCGACCTTCGCCACCGTGCGTGATGTATATGCCG ATACGCCGGAGGGTGCTTCGCTGTATGGGTTGTTCGCCTCGATGCTGGCCTTCGTGCCCGCGCTCGGTCCGATCCTTGGT GCGTTGGTGGCAGGCGCATTCGGCTGGCGTGCAATCTTCGCATTGCTGGGCGTGCTCGGCCTGATCGCCGGCCTGCGCGC GCAACGTCATTGGCAGGAGACCCGCCCGCCGCGCAGCGACGCGCCAGGCCCGGTGCTGCAGCGCATCCTCCGCAGCGGTG GGTTCTGGGTGTACACGCTGGGTTTCAGTGCGGGCATGGGCACCTTCTTCGTGTTCTTCTCGATCGCCCCCCGCATCCTG GTTGGACGCATGCAGTACTCGCCGCTGTCCTTCGGCTTGGCGTTCGCAACGGTGGCGCTGGTGATGATTTTCAGCGCGCG CTTGGCGAAGAGGCTGATCGCCCGCTGGCAGGTGCGCGGGACCTTCCTGCGTGGGCTGTGGGTGATGATCGGCGGGGCGT TGCTGATGGCACTAGCGACGCTGTGGCCGCCGTCATTCGCCAGCGTGGTGCTGCCGATGTGGGCCATCGCGGTGGGCCTG GTGATGGTGGTATCGGTGGCTGCCAACGGCGCATTGCGTGATTTCGCCGATGCCTCGGGGATGGCGGTGGCGCTCTACTA CGCCCTGCAGAGCGTGATCGTTGCCGGCGTGGGGACGTTGGCTACCGTGCTGCTGCCGGGAGACACGGTGTGGCCGCTGG TGGCCTGTGGGCTGCTGTTGCCGCTGGCCAGCCTGCTGGCCGCAAGCTGCCTGCCACGTGGCGCATAG Protein sequence : MFNRQAPRWAHSLASAIVLMAPFDLLASLAMDIYLPVVPAMPRALGTSPVLVQLTLSAYLLVLGVGQLVFGPLSDRIGRR PVLLLGALLFTVASIALAASGSGAAFLAWRTVQAIGASAALVATFATVRDVYADTPEGASLYGLFASMLAFVPALGPILG ALVAGAFGWRAIFALLGVLGLIAGLRAQRHWQETRPPRSDAPGPVLQRILRSGGFWVYTLGFSAGMGTFFVFFSIAPRIL VGRMQYSPLSFGLAFATVALVMIFSARLAKRLIARWQVRGTFLRGLWVMIGGALLMALATLWPPSFASVVLPMWAIAVGL VMVVSVAANGALRDFADASGMAVALYYALQSVIVAGVGTLATVLLPGDTVWPLVACGLLLPLASLLAASCLPRGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cmlA9 | ABZ01840.1 | CmlA9 chloramphenicol efflux protein | Not tested | SGI2 | Protein | 5e-83 | 60 |
| cmlA | CAJ77032.1 | chloramphenicol and florfenicol resistance protein | Not tested | AbaR1 | Protein | 5e-83 | 60 |
| flo | AAK02049.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 2e-82 | 60 |
| floRc | AGK06972.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 2e-82 | 60 |
| floRc | AGK07102.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 2e-82 | 60 |
| floR | YP_005176183.1 | florfenicol / chloramphenicol efflux protein | Not tested | ICEPmu1 | Protein | 2e-81 | 59 |
| cml(A)5 | ACY75522.1 | CmLA(5) | Not tested | Tn6060 | Protein | 4e-67 | 50 |
| cmlA5 | CAJ77046.1 | Chloramphenicol resistance protein | Not tested | AbaR1 | Protein | 4e-67 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smal_3550 | YP_002029932.1 | Bcr/CflA subfamily drug resistance transporter | AF294653.1.gene4.p01 | Protein | 2e-67 | 51 |
| Smal_3550 | YP_002029932.1 | Bcr/CflA subfamily drug resistance transporter | DQ984668.gene.p01 | Protein | 3e-67 | 50 |
| Smal_3550 | YP_002029932.1 | Bcr/CflA subfamily drug resistance transporter | DQ522237.1.gene4.p01 | Protein | 3e-67 | 50 |
| Smal_3550 | YP_002029932.1 | Bcr/CflA subfamily drug resistance transporter | NC_010410.6003586.p0 | Protein | 3e-67 | 50 |
| Smal_3550 | YP_002029932.1 | Bcr/CflA subfamily drug resistance transporter | AF156486.gene.p01 | Protein | 9e-66 | 50 |
