Gene Information

Name : Smal_3256 (Smal_3256)
Accession : YP_002029638.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 3655521 - 3657632 bp
Length : 2112 bp
Strand : -
Note : catalyzes branch migration in Holliday junction intermediates

DNA sequence :
GTGGCACGCAAGGCGGCGGTCACCCCGGTCCTGTCACCGTCCGGCGAAGCATCGCTTGCGATGCTCGCCGGCGTCGGTCC
GGCCGTGGCCGCCAAACTGCAGGCGCGTGGCCTGGCCACCCTGCAGGATCTCTGGCTTCATCTGCCGCTGCGCTATGAAG
ACCGGACCCGGCTGACCCGCATCGAAGACCTGCGCAACGGCGTGCCGGCGCAGGTGGAAGGGCGGGTGGTCGCGGTCGAG
CGCGGCATGCGCTACCGGCCGATGCTGAAAGTGGCGGTGGAAGACGAAGGGCAGGGCACCCTGGTGCTGCGCTTCTTCCA
CTTCCGCCAGCAGCAGGTCGGACAGTTCGCGGTCGGCAACCGGCTGCGCTGCTTCGGCACGCCCAAACCCGGCCACCTCG
GCCTGGAAATCGTCCACCCCAGCTACCAGGTGCTGGGCCGCAACGACGATCCCGAACTCGGCGACCGCCTCGACCCGGTG
TATCCCACCGTCGAAGGCGTCGGCCCGATGACCATGCGCAAGCTGATCGGCCAGGCGCTGGACCGCCTGCCCGAGGAAAG
CACGCTGGAACTGCTGCCCAGCGGCTGGCTGGATGGCCTCGGCCTGCCGTCACTGCGCAGCGCCCTGCTGACCGTGCACC
GGCCGCCGCCGGATGCCGACCTGGCCGCGCTGGCCGCAGGCACCCATCCGGCGCAGCGCCGGCTGGCAATGGAAGAGCTG
CTGGCCCACCACCTCAGCCTGCGTCGCCAGCGGATCGCCTTGCAGGCACACCACGCGCCGCCGCTGGCCGGTCCCGGCAA
GCTGGCCAAGGCACTGCTGAAGCAGCTGCCGTTCGCGCTGACCGGCGCACAGGCGCGTGTGTTCAAGCAGATCCGCGAAG
ATCTCGCCCGCCCCAGCCCGATGCTGCGGCTGGTGCAGGGCGACGTCGGCTCCGGCAAGACCGTGGTTGCCGCACTGGCG
GCGATGCTGGCGGTGGAGCAGGGCAAGCAGGTCGCACTGGCTGCCCCTACCGAACTGCTGGCTGAGCAGCATCTCAACAA
CCTGCGCGGCTGGCTGGAGCCGCTCGGCGTGCGCATCGCCTGGCTGGCCGGCAAGGTTACCGGCAAGGCGCGCGCCAAGG
TGATGGAGCAGGTCGCCAACGGCGAAGCGCAGGTCGTGGTCGGCACCCACGCGCTGATGCAGGAGGCGGTGGTGTTCCAG
GACCTGGCCCTGGCCATCGTCGACGAGCAGCACCGCTTCGGCGTGCGCCAGCGATTGGCGCTGCGCGACAAGGGCGCGGG
CGGCAACAGCGTGCCGCACCAGCTGGTGATGACCGCCACGCCGATTCCACGCACGCTGGCGATGTCCGAGTATGCGGACC
TGGATGTCTCGGCCATCGATGAGTTGCCACCGGGCCGCACGCCGGTGCAGACGGTTGCATTGAACAATGATCGCCGCCCG
GAACTGATCGAACGCATCGCCCTGGCCTGCCAGGAAGGGCGACAGGTGTACTGGGTGTGCACGCTCATTGAAGAAAGCGA
AGAGTTGGATGCCACCCCGGCGCAGGCCACCTACGAATCGCTGCAGGCGCTGCTGCCGGGTGTGCGCGTCGGGCTGGTGC
ATGGCCGGCTGAAGGCGGCGGAAAAGCTGGCAACGATGGTGGCGTTCAAGGCCGGCGAGATCGACCTGCTGGTGGCCACC
ACCGTGATTGAAGTGGGCGTGGACGTACCGAATGCCTCGCTGATGGTGATCGAGAACGCCGAGCGCCTCGGCCTGGCGCA
GCTGCACCAGCTGCGCGGCCGCGTGGGTCGTGGTTCGGCGGTCTCGCGCTGCGTGCTGTTGTACCAGGCGCCGCTTTCGC
AGATGGCGCGCGAGCGTTTGCAGACCATGCGCGAAACCAACGATGGCTTCGTCATCGCCGAGAAGGATCTGGAACTGCGC
GGCCCCGGCGAACTGCTGGGTACCCGGCAGACCGGCCTGGCCGGCTTCCGCATTGCCGACCTGGCCCGCGACGCCGGCCT
GCTGCCCGGCGTGCATGACCTGGCCGAGCGCCTGCTGGACCAGCAACCCGCGCTGGCCGATCGCGTGGTGCAACGCTGGA
TCGGCACCGCCGTGCGCTACGCCTCGGCGTAA

Protein sequence :
MARKAAVTPVLSPSGEASLAMLAGVGPAVAAKLQARGLATLQDLWLHLPLRYEDRTRLTRIEDLRNGVPAQVEGRVVAVE
RGMRYRPMLKVAVEDEGQGTLVLRFFHFRQQQVGQFAVGNRLRCFGTPKPGHLGLEIVHPSYQVLGRNDDPELGDRLDPV
YPTVEGVGPMTMRKLIGQALDRLPEESTLELLPSGWLDGLGLPSLRSALLTVHRPPPDADLAALAAGTHPAQRRLAMEEL
LAHHLSLRRQRIALQAHHAPPLAGPGKLAKALLKQLPFALTGAQARVFKQIREDLARPSPMLRLVQGDVGSGKTVVAALA
AMLAVEQGKQVALAAPTELLAEQHLNNLRGWLEPLGVRIAWLAGKVTGKARAKVMEQVANGEAQVVVGTHALMQEAVVFQ
DLALAIVDEQHRFGVRQRLALRDKGAGGNSVPHQLVMTATPIPRTLAMSEYADLDVSAIDELPPGRTPVQTVALNNDRRP
ELIERIALACQEGRQVYWVCTLIEESEELDATPAQATYESLQALLPGVRVGLVHGRLKAAEKLATMVAFKAGEIDLLVAT
TVIEVGVDVPNASLMVIENAERLGLAQLHQLRGRVGRGSAVSRCVLLYQAPLSQMARERLQTMRETNDGFVIAEKDLELR
GPGELLGTRQTGLAGFRIADLARDAGLLPGVHDLAERLLDQQPALADRVVQRWIGTAVRYASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-93 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_3256 YP_002029638.1 ATP-dependent DNA helicase RecG BAC0356 Protein 1e-158 59