Gene Information

Name : Smal_2945 (Smal_2945)
Accession : YP_002029327.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3281482 - 3282315 bp
Length : 834 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: bpl:BURPS1106A_1714 transposase and inactivated derivatives

DNA sequence :
TTGAGGCAGGTTCATACGCTGTCGCTTCTGCTCGAAGCAGCTGAGCTGTCACGCAGTACGTTCTATTACCAGAACCATGT
CCTGGCCCATCCGGATCAGGACGAGGCACAGCTGTGCGAGCGCATCCGTGCAATCTACGATCAAAGCCAAGGGCGCTATG
GCTATCGCACGGTGACGCTGGAATTAGCCAATCAGGGCCATCGGACCAATCACAAGCGGGTTCAGCGCCTGATGGGGGAG
ATGGGGCTGAAATCGCGGGTGCGTGTGAAGCGCTACCAGGCCTTCAAGGGGGCGGCCAACGTTGTGGTTGGCAATGACCT
CAATCGCCAGTTCCATGCCGAGCGCCCCAACCAGAAATGGGTGACTGACGTGACCGAGTTCAAGGTGCAGGGCATGAAGC
TGTACCTGTCGCCGATCATGGACCTCTACAACGGCGAAATCGTGGCTTATCAGATCAAGCGTCGGCCCGTATTTGATCTG
GTGGGCCAAATGCTGGAGGAGGCCATCAAGAAGCTTCCCCCGGATGAGCGCCCCATGATCCACTCCGACCAGGGCTGGCA
GTACCAGCATGAAAACTACCGGCACATGCTGGAAAAGCACTCGTTGAAACAAAGCATGTCCCGGCGCGGCAACTGCCTGG
ACAATGCGGCGATGGAGAGCTTCTTTGGGACGCTGAAGTCGGAATTCTTCTACCTGAACAGCTTTGACAGCATCGAGAGT
CTGGAAGCTGGGCTGGTGGAATACATCCAGTACTACAACGAAGAGCGCATCAAACTGAAACTGAAAGGTCTCAGCCCGAT
AAAGTACCGGGAGCAGGCCCAATCGGCCGCCTGA

Protein sequence :
MRQVHTLSLLLEAAELSRSTFYYQNHVLAHPDQDEAQLCERIRAIYDQSQGRYGYRTVTLELANQGHRTNHKRVQRLMGE
MGLKSRVRVKRYQAFKGAANVVVGNDLNRQFHAERPNQKWVTDVTEFKVQGMKLYLSPIMDLYNGEIVAYQIKRRPVFDL
VGQMLEEAIKKLPPDERPMIHSDQGWQYQHENYRHMLEKHSLKQSMSRRGNCLDNAAMESFFGTLKSEFFYLNSFDSIES
LEAGLVEYIQYYNEERIKLKLKGLSPIKYREQAQSAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 8e-75 56
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 5e-67 51
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 4e-57 50
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 4e-57 50
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 6e-48 43
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 1e-48 43
tnp BAG06206.2 transposase for ISSau4-like Not tested Type-VII SCCmec Protein 7e-28 41