Gene Information

Name : Smal_0290 (Smal_0290)
Accession : YP_002026678.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 340271 - 342328 bp
Length : 2058 bp
Strand : -
Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions

DNA sequence :
ATGAGTACCCAAGCAAGTTCAACCCGTAGTACCCATGCACCGCGCCCTGCCCTGCTGGATGGCGCCGGCCTGCGCCGTGC
GCTGATCGAAGCGGTTCTCAAGCTGTCGCCGATGCATCTGGTGCGCAGCCCGGTGATGGCGGTGGTGATGGCCGGCACGA
TCGTCGCCGCGATCGTCACCCTGACCGGCAATGCGCCGCTGGGCTTCGGCCTGGCGGTGACCGCGATCCTGCTGGTGACC
GTGCTGTTCGGCAACTTCGCCGAAGCCGTGGCCGAAGCGCGTGGCCGTGGCCAGGCCGCGTCGCTGCGGCGTGCCCGCCA
GGACCTGGTGGCGCGCCGGCTGGCCACGCCGCAGCCGGGTGCCGCCGAAACCCAGGTGCCGGCCGCCGAACTGCGCCCGG
GCGACCACGTGATCGTCAGCGCCGGTGAGCTGGTGCCGGCCGATGGCGAGATCGTGCAGGGCCTGGCCACCATCAACGAA
GCCGCGGTGACCGGCGAATCGGCGCCGGTGCTGCGCGAGGCCGGTACCGACCGCTCCGGCGTGATCGGCGGCACCAAGGT
GCTGTCCGACCAGATCATCGTGCGGGTGACCGCCGAACCGGGCCACAGCTTCCTGGACCGGATGATCGCGCTGGTGGAAG
GCGCCAACCGCCAGAAGACCCCGAACGAGATCGCGCTGACCCTGCTGCTGGCGGCGATGACGCTGACCTTCCTGGTGGTG
GTGGCAACGCTGCCGGCCATTGGTGCCTCCGTGGGCGTCAAGGTCGACCCGCTGTTGCTGATCGCGTTGCTGGTGTGCCT
GATCCCGACCACCATCGGCGGCCTGCTGCCGGCCATCGGCATCGCTGGCATGAACCGTGCGCTGGCCGCCAACGTGCTGG
CCAAGTCGGGCAAGGCGGTGGAAGTGGCCGGCGACGTCGACGTGCTGCTGCTGGACAAGACCGGCACCATCACCTACGGC
GACCGCCAGGCCAGCCATTTCCATCCGCTGGCCGGCATCGACGCCAGCCAGCTGCGCGAAGCAGCACTGCTCTCTTCGCT
GGCCGACCCGACCCCGGAAGGCAAGTCGATCGTGCGCCTGGCGCGCGAACAGGGCTGCGCCACCGCCGAGCCGGACCATG
CCGACTACCTGGCCTTCAGTGCACAGACCCGCATGTCCGGCGTGGACCTGGAACATGGGCGGCAGATCCGCAAGGGCGCC
GCCGATGCGATCCGTGCCCACGTGCAGGCGCTGGGCGGCAGCGTGCCGGCTGAACTTGCCGGACGCGTGGAGCAGGTGGC
GCGTAACGGTGCCACCCCGCTGGTGGTGGCCGAAGGTCGCCACGTGCTCGGCGTGATCGAGCTGTCGGACGTGGTCAAGC
ACGGCATGCGCGAGAAGTTCGCGCAGCTGCGGGCGATGGGCATCCGCACGGTGATGATCACCGGCGACAATCCGCTGACC
GCCGCCGCCATCGCCGCCGAAGCCGGCGTCGACGACTACATCGCCGAGGCTCGCCCGGAGGACAAGCTGGCACGCATCCG
CCAGGAACAGGCCGGTGGCCGCCTGGTGGCGATGGTCGGCGATGGCACCAACGACGCACCGGCGCTCGCCCAGGCCGACA
TCGGCCTGGCAATGAACTCCGGCACGCAGGCGGCAAAGGAAGCCGGCAACATGGTCGACCTCGATTCGGATCCGGCCAAG
CTGCTGGCAGTGGTGGAAGTGGGCAAGCAACAGCTGATCACCCGCGGTGCGCTGACCACCTTCTCGCTGGCCAACGACGT
CTCCAAGTACTTCGCGATCCTGCCGGCGCTGTTCGCCGCCGCCGTGCCGACCATGGCCGCATTGAACGTGATGCAGCTGT
CGAGCCCGCGCAATGCGGTGCTGGCGGCGTTGATCTTCAACGCCCTGGTGATTCCCGCCCTGATCCCGCTCGCCCTGCGT
GGCGTGCGCTTCCGCCCGGCCACTGCAACCGCGCTGCTGCGCCGGAACATGCTGGTGTACGGCCTCGGCGGCGTGCTGCT
GCCGTTCGCAGCGATCAAGGCGATCGACCTTCTTCTTGTCCTGGTATTCGGCGCATGA

Protein sequence :
MSTQASSTRSTHAPRPALLDGAGLRRALIEAVLKLSPMHLVRSPVMAVVMAGTIVAAIVTLTGNAPLGFGLAVTAILLVT
VLFGNFAEAVAEARGRGQAASLRRARQDLVARRLATPQPGAAETQVPAAELRPGDHVIVSAGELVPADGEIVQGLATINE
AAVTGESAPVLREAGTDRSGVIGGTKVLSDQIIVRVTAEPGHSFLDRMIALVEGANRQKTPNEIALTLLLAAMTLTFLVV
VATLPAIGASVGVKVDPLLLIALLVCLIPTTIGGLLPAIGIAGMNRALAANVLAKSGKAVEVAGDVDVLLLDKTGTITYG
DRQASHFHPLAGIDASQLREAALLSSLADPTPEGKSIVRLAREQGCATAEPDHADYLAFSAQTRMSGVDLEHGRQIRKGA
ADAIRAHVQALGGSVPAELAGRVEQVARNGATPLVVAEGRHVLGVIELSDVVKHGMREKFAQLRAMGIRTVMITGDNPLT
AAAIAAEAGVDDYIAEARPEDKLARIRQEQAGGRLVAMVGDGTNDAPALAQADIGLAMNSGTQAAKEAGNMVDLDSDPAK
LLAVVEVGKQQLITRGALTTFSLANDVSKYFAILPALFAAAVPTMAALNVMQLSSPRNAVLAALIFNALVIPALIPLALR
GVRFRPATATALLRRNMLVYGLGGVLLPFAAIKAIDLLLVLVFGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-132 54
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-132 54
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-132 54
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-132 54
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-132 54
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-132 54
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-136 53
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-136 53