Gene Information

Name : Smal_2637 (Smal_2637)
Accession : YP_002029020.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 2947359 - 2948789 bp
Length : 1431 bp
Strand : -
Note : unwinds double stranded DNA

DNA sequence :
ATGTCCGCCCGTTCCGGCTTCCGTTCCAACCGCAGAGAGCGCGGTGATGGCTTTGATCGTGATCGCGACGAGTCGCGCAT
CGATCAGTTGCGTGTGCCGCCGCATTCGGTGGAAGCCGAGCAGGCGGTGCTGGGTGGGCTGATGCTGGCGCCGGAGGCCT
ATGACCGGGTCAACGACCAGCTGACCGAGGGCGATTTCTATCGCCGCGACCATCAGATGATCTACCGCGCGATCCGGGAG
CTGTCCGAACGTGAACGTCCGTTCGATGCGGTGACCCTGGGCGAGTGGTTCGAATCGCAGGGCAAGCTGGAGCTGGTCGG
CGATGGTGCCTATCTGATCGAACTGGCCAGCACCACGCCGTCGGCGGCCAACATCGTGGCCTACGCCGAAATCGTGCGTG
ACAAGGCGGTGCTGCGGCAGCTGATCCAGGTCGGCACCGACATCGTCAACGATGGCTTCCAGCCTGAAGGCCGCGACAGC
AGCGAGCTGCTGGCCTCGGCGGAAAAGAGCGTGTTCGCCATCGCCGAGCAGGGCGCGCGCGGCCGTACCGACTTCGTGGC
CATGCCTGGCGCGCTGAAGGATGCCTTCGAGGAACTGCGCAACCGCTTCGAGAACGGCGGCAACATTACCGGCCTGCCGA
CCGGTTACAACGACTTCGACGCGATGACCGCCGGCCTGCAGCCGACCGACCTGATCATCCTCGCTGCGCGCCCGGCCATG
GGCAAGACCACCTTCGCGCTGAACATCGCCGAGTATGCGGCGATCAAGTCGAAGAAGGGCGTGGCGGTGTTCTCGATGGA
AATGTCGGCCTCGCAGCTGGCGATGCGCCTGATTTCCTCCAACGGCCGCATCAACGCGCAGCGCCTGCGTACCGGCCAGC
TGGAAGACGAGGACTGGAGCCGCGTCACCAGCGCGATCAAGATGCTGAAGGAAACCAAGATCTTCATCGACGACACGCCG
GGCGTGTCGCCGGAAGTGCTGCGTTCCAAGTGCCGCCGCCTCAAGCGTGAACATGATCTTGGCCTGATCGTGATCGACTA
CCTGCAGCTGATGAGCGTGCCGGGCAACAGCGAGAACCGCGCGACCGAAATCTCGGAAATCTCGCGTTCGCTGAAGGGCC
TGGCCAAGGAGCTGCACGTACCGGTGATCGCGTTGTCCCAGCTCAACCGCTCGCTGGAAACGCGTACCGACAAGCGCCCG
GTGATGGCCGACCTTCGCGAATCGGGCGCTATCGAGCAGGACGCGGACATGATCGTGTTCATCTACCGCGACGATTACTA
CAACAAGGAAAATTCGCCGGACAAGGGCCTGGCCGAGATCATCATCGGCAAGCACCGTGGTGGTCCGACCGGCTCGTGCA
AGCTGAAGTTCTTCGGCGAGTACACCCGCTTCGACAACCTGGCCCACGATTCGGTCGGTTCGTTCGAGTAA

Protein sequence :
MSARSGFRSNRRERGDGFDRDRDESRIDQLRVPPHSVEAEQAVLGGLMLAPEAYDRVNDQLTEGDFYRRDHQMIYRAIRE
LSERERPFDAVTLGEWFESQGKLELVGDGAYLIELASTTPSAANIVAYAEIVRDKAVLRQLIQVGTDIVNDGFQPEGRDS
SELLASAEKSVFAIAEQGARGRTDFVAMPGALKDAFEELRNRFENGGNITGLPTGYNDFDAMTAGLQPTDLIILAARPAM
GKTTFALNIAEYAAIKSKKGVAVFSMEMSASQLAMRLISSNGRINAQRLRTGQLEDEDWSRVTSAIKMLKETKIFIDDTP
GVSPEVLRSKCRRLKREHDLGLIVIDYLQLMSVPGNSENRATEISEISRSLKGLAKELHVPVIALSQLNRSLETRTDKRP
VMADLRESGAIEQDADMIVFIYRDDYYNKENSPDKGLAEIIIGKHRGGPTGSCKLKFFGEYTRFDNLAHDSVGSFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-95 50
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-90 48
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-89 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-82 46
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 3e-88 46
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-80 46
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-78 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-78 46
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-65 42