Gene Information

Name : Smal_0253 (Smal_0253)
Accession : YP_002026641.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 303003 - 303692 bp
Length : 690 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xac:XAC3996 ABC transporter ATP-binding protein

DNA sequence : 
ATGTCGACCCTGGTTTCATTGCGCAACATCACCAAGACCTACCAGCGCGGCCCCGAAAAGGTGCAGGTGCTGCACGGCAT
CGACCTGGACATCGCCAGCGGCGACTTCGTCGCGCTGATGGGCCCGTCCGGCTCGGGCAAGACCACCCTGCTCAACCTGA
TCGGCGGCCTGGACAATCCCAGCGGCGGCGAGATCAGCATCGAAGGCGAGCGCATCGACCAGATGAGCGGCGGCCAGCTG
TCGACCTGGCGCAGCCACCACGTCGGCTTCGTGTTCCAGTTCTACAACCTGATGCCGATGCTGACCGCGCAGAAGAATGT
GGAACTACCGCTGCTGCTGACCCATCTCAGTGCGGCGCAGCGCAAGCGCAATGCGGAGATCGCACTGACCCTGGTCGGCC
TGGCCGACCGCCGCAGCCATCGCCCGAATGAACTGTCCGGCGGCCAGCAGCAGCGCGTGGCGATCGCGCGCGCAATCGTC
TCCGACCCGACTTTCCTGATCTGCGATGAACCTACCGGCGATCTTGACCGCCAGTCTGCCGAGGAGATCCTGGGCCTGCT
GCAGCAGCTCAACCGCGAGCACGGCAAGACCATCATCATGGTCACCCATGACCCGAAGGCCGCCGAGTACGCCACGCACA
CAGTGCACCTGGACAAGGGCGAGCTGGCCGACGCGCCGCTGACCCACTGA

Protein sequence : 
MSTLVSLRNITKTYQRGPEKVQVLHGIDLDIASGDFVALMGPSGSGKTTLLNLIGGLDNPSGGEISIEGERIDQMSGGQL
STWRSHHVGFVFQFYNLMPMLTAQKNVELPLLLTHLSAAQRKRNAEIALTLVGLADRRSHRPNELSGGQQQRVAIARAIV
SDPTFLICDEPTGDLDRQSAEEILGLLQQLNREHGKTIIMVTHDPKAAEYATHTVHLDKGELADAPLTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_0253 YP_002026641.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-51 48
Smal_0253 YP_002026641.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-41 45
Smal_0253 YP_002026641.1 ABC transporter-like protein CP001581.1.gene798.p Protein 6e-45 42
Smal_0253 YP_002026641.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-41 41