Gene Information

Name : Smal_2410 (Smal_2410)
Accession : YP_002028796.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Unknown
Product : RNA binding S1 domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 2712447 - 2714834 bp
Length : 2388 bp
Strand : -
Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: xcb:XC_1964 transcription-related protein

DNA sequence :
ATGCACGACGCCAAGAACGCCCAGAGCGCGCTCGCCCAGCAGATCGCCCAGACCATCGCCGACGAGATCGGTGCCCAGTC
CACCCAGGTACGTGCCGCCGTCGGCCTGCTCGACGAGGGCGCCAGCGTCCCGTTCATCGCCCGCTACCGCAAGGAAGTGA
CCGGAGGCCTGGACGACACCCAGCTGCGCAACCTGGAAACCCGCCTCACCTACCTGCGTGAGCTGGAAGACCGCCGCGCC
GCCGTGTTGTCCAGCATCGGCGAGCAGGGCAAGCTCAGCGACGAGCTGCGCAACGACATCCTGGCCGCCGATACCAAGAG
CCGGCTGGAAGACCTGTACCTGCCGTACAAGCCCAAGCGCCGTACCCGTGCACAGATTGCCCGCGAGGCCGGCCTGGAAC
CGCTGGCCGATGGCCTGCTGAACGACCCGACGCGGGACCCGCAGGTCTTTGCCGCTGGTTTCGTCGACACCGACAAGGGT
GTGGCCGACACCAAGGCCGCACTGGAGGGCGCGCGCGCGATCCTGATGGAGCGCTGGGGTGAAGACGCCGCGCTGGTCGG
TGAACTGCGCACGTGGCTGGGCGAGACCGGGGTGATCCGTGCCCGCGTGGCCGAGGGCAAGGAAACCGAAGGCGCCAAGT
ACCGCGATTATTTCGAACACGCCGAAGCGCTGGCGAAGATTCCGTCGCACCGCCTGCTGGCACTGTTCCGCGCACGCCGC
GAGGAAATCCTGTTCCTGGAGCTGGACCCGGGCAGTGATGCCGAGGCTGGCCACCAGTACGCGGAAGGCCGTGTGGCGCG
CAAGGCCGGCATTGCCGACCAGGGGCGCGCTGGCGACCGCTGGCTGCTGGATGCCTGTCGCCTGACCTGGCGCGCCAAGC
TGCATACCCATCTGCTGCTGGACCTGTTCAACCAGGCCCGCGAAAAGGCCGAGGCCGAAGCCATCGCGGTGTTCGGTGAC
AACCTGAAGGACCTGCTGCTGGCCGCGCCGGCCGGCCCGAAGACCGTGCTCGGGCTGGACCCGGGCATCCGCACCGGCTG
CAAGATCGCCGTGGTCGATGCTACCGGCAAGCTGGTCGCCACCGAGACCATCTACCCGCATGAGCCGCGCCGTCAGTGGG
AGCAGTCGCTGCAGACCATCAAGCAGCTGTGCGCCAAGCACAACGTGGAACTGATCGCGATCGGCAACGGCACCGCCAGC
CGCGAAACCGACAAGCTGGCCGGTGAGGCGATCAAGGCCGCGGCCAACCCGAAGCTGCAGAAGGTGGTGGTCAGCGAGGC
CGGTGCCTCGGTGTACTCGGCCTCGGAGTTCGCGGCCAAGGAGTTCCCGGGCCTGGACGTGTCGCTGCGCGGTGCGGTGT
CGATCGCGCGCCGCCTGCAGGACCCGCTGGCCGAGCTGGTGAAGATCGAGCCCAAGGCGATCGGTGTCGGCCAGTACCAG
CACGACGTGGACCAGTACCGCCTGGCACGGGCGCTGGACGCACGCGTGGAGGACTGCGTGAACGCGGTTGGCGTGTACGT
GAACACCGCTTCGGCCGCGCTGCTGTCGCGGGTGTCCGGCCTGTCGGCCACGGTGGCCGAGAACATCGTGCGCCATCGTG
ACGACAACGGCCCGTTCAAGCGCCGCAAGGACCTGCTGAAGGTGTCGCGGCTGGGCGAGAAAACCTTCGAGCAGTGCGCC
GGCTTCCTGCGCATCGCCGATGGCGACGAACCGCTGGACGCGTCGGCGGTGCACCCGGAAGCCTACCCGGTGGTCGAGCG
CATCGTGGCCAGCACCGCGCGCCCGATCAAGGCGCTGATCGGCGATGGCAGCTTCCTGCGTGGACTGAAGGCCGAGCAGT
TCACCGACGCGACCTTCGGTGTTCCGACCGTGCGCGACATCCTCAAGGAAATGGAAAAGCCGGGCCGTGACCCGCGTCCG
GAGTTCAAGGCGGCGCGCTTCGCCGAGGGCGTCGAGGACATCAAGGATCTGCGCGAGGGCATGGTGCTGGAGGGCGTGGT
CAGCAACGTCGCGGCCTTCGGCGCCTTTGTCGATATCGGCGTGCACCAGGACGGCCTGATCCACATTTCGGCGCTCTCCG
ATACGTTCGTGAAGGATCCGCGCGACGTGGTCAAGGCCGGCGATATCGTCAAGGTGAAGGTGCTGGAGGTGGACGTGGCG
CGCAAGCGCATCGCCCTGACCCGACGCCTGGACGACACCCCCGGCCAGGCCACCAGCCGCCCGGGCCAGCGCGACGAACG
TAGTCAGGGCCAGGGGCCGCGTCGTGACGCAGGTGGCCAGAACCGTGGCCCCAACCGCAGCCCGGGCAATGGCGGCCGCG
GCGGCCAGTCGGCGGCGCCGGCCAACAATGCCCTGGCAGAAGCCTTCGCCCGCGCCAAGCGCAGCTGA

Protein sequence :
MHDAKNAQSALAQQIAQTIADEIGAQSTQVRAAVGLLDEGASVPFIARYRKEVTGGLDDTQLRNLETRLTYLRELEDRRA
AVLSSIGEQGKLSDELRNDILAADTKSRLEDLYLPYKPKRRTRAQIAREAGLEPLADGLLNDPTRDPQVFAAGFVDTDKG
VADTKAALEGARAILMERWGEDAALVGELRTWLGETGVIRARVAEGKETEGAKYRDYFEHAEALAKIPSHRLLALFRARR
EEILFLELDPGSDAEAGHQYAEGRVARKAGIADQGRAGDRWLLDACRLTWRAKLHTHLLLDLFNQAREKAEAEAIAVFGD
NLKDLLLAAPAGPKTVLGLDPGIRTGCKIAVVDATGKLVATETIYPHEPRRQWEQSLQTIKQLCAKHNVELIAIGNGTAS
RETDKLAGEAIKAAANPKLQKVVVSEAGASVYSASEFAAKEFPGLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQ
HDVDQYRLARALDARVEDCVNAVGVYVNTASAALLSRVSGLSATVAENIVRHRDDNGPFKRRKDLLKVSRLGEKTFEQCA
GFLRIADGDEPLDASAVHPEAYPVVERIVASTARPIKALIGDGSFLRGLKAEQFTDATFGVPTVRDILKEMEKPGRDPRP
EFKAARFAEGVEDIKDLREGMVLEGVVSNVAAFGAFVDIGVHQDGLIHISALSDTFVKDPRDVVKAGDIVKVKVLEVDVA
RKRIALTRRLDDTPGQATSRPGQRDERSQGQGPRRDAGGQNRGPNRSPGNGGRGGQSAAPANNALAEAFARAKRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 62