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Name : Smal_2393 (Smal_2393) Accession : YP_002028779.1 Strain : Stenotrophomonas maltophilia R551-3 Genome accession: NC_011071 Putative virulence/resistance : Unknown Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 2691444 - 2693732 bp Length : 2289 bp Strand : - Note : PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: psa:PST_2250 probable Orn/Arg/Lys decarboxylase DNA sequence : GTGTACTTCAAGTCCCTGGACTATCCGGTCATTGTCATCGACAACGACTACGAGTCGCCGCGCATCGGCGGCATCCTGAT CCGCGCCCTGGTGGAGGAGCTGCGCAGCAACGACCAGCGCGTGCTGTGCGGCCTGAACCTGGATGATGCCCGCGCCGGTG CCCGCACCTACGTGGCAGCCTCCGCGGTGCTGATCTCGATCGATGGCAGCGAGGAAGTGGATGGCGAGTTCCAGCGCCTC ACCGCCTTCCTGCGCGAGCAGAGTGCGCGCCGCGCCAACCTGCCGGTGTTCCTGTACGGCGAGCGCCGCACCATCGAGAA AGTGCCGAGCAAGCTGCTCAAGTACATCCACGGCTTCATCTTCCTGTTTGAAGATACCAAGAGCTTCATCTCGCGGCAGG TGATGCGCGCGGCCGAAGACTACATGAAGAACCTGCTGCCGCCGTTCTTCAAGGCACTGATCCACCATGCGGCCGAGTCG AACTACTCCTGGCACACGCCCGGCCATGCCGGCGGCGTGGCGTTCACCAAGTCGCCGGTCGGCCGTGCATTCCATCAGTT CTACGGCGAGAACACCCTGCGCAGCGATCTGTCGATCTCGGTGCCGGAGCTGGGTTCGCTGCTCGATCACACCGGCCCGA TCAAGGACGCCGAGAACGAGGCCGCACGCAATTTCGGTGCCGACCATACCTTCTTCGTCACCAACGGCACCCCCACTGCC AACAAGATCGTCTGGCACGGTACGGTGGCCCGCGGCGACGTGGTGTTCGTCGACCGCAACTGTCACAAGTCGCTGCTGCA CGCGCTGATCATGACCGGTGCGGTACCGGTGTACTTCACCCCCAGCCGCAACGCGCACGGCATCATCGGCCCGATCAGCC TGGACCAGTTCACGCCGGAGTCGCTGCAGCAGCGCATCGCCGCCAACCCGCTGGCCAGCCAGGCTTACAAGGCCGGCTCC AAGCCGCGCATTGCGGTGGTCACCAACTCGACCTACGACGGCCTGTGCTACAACGCCGAGAAGATCGCCGACGAGATCGG CAGCGCGGTCGATTTCCTGCATTTCGACGAAGCGTGGTACGCCTATGCTGCGTTCCATCCGTTCTACGAGAACCATTACG GCATGGCCAAGGGCAAGCCGCGTGAGCAGGATGCGATCATCTTCACCACGCATTCCACCCACAAGCTGCTGGCTGCGTTC TCGCAGGCGTCGATGATCCACGTGCGCAATTCGGCGCAGCGCAACCTGGATGCCGAGCGCTTCAACGAGTCGTTCATGAT GCACACCTCGACCAGCCCGCACTACGGGGTGATCGCGGCCTGTGATGTGGCGTCGAAGATGATGGAAGGCGATGCCGGCC GCTCGCTCGTACAGGAAATGCATGACGAAGCCATCGCCTTCCGCCGCGCGATGCTGCACGTGCGCGATGACCTCGGTCGC GACGACTGGTGGTTCAGCGTGTGGCAGCCGACCCAGGTCGAGCGCAGTCTGGACAAGGGCGATACGCCGGCGCCGCTGGT GGCCAAGCGCGAGGAGTGGTACCTGCAGCCGGATGCGCACTGGCATGGCTTCGAGAACCTGGTCGACGACTATGTGCTGA TCGACCCGATCAAGGTGACCCTGCTGACCCCGGGCCTGGCGATGGACGGCAGCATGGGCAAGCTTGGCATTCCGGCAGCG GTGCTTAGCAAGTTCCTGTGGGGCCGCGGCATCACCGTGGAAAAGACCAATCTGTACTCGGTGCTGTTCCTGTTCTCGAT GGGCATCACCAAGGGCAAGTGGAGCACCCTGGTCACCGAGCTGATGGCGTTCAAGGAACTCTACGACCGCAATGCGCCGC TGAGCCAGGCACTGCCGACGCTGGCTGCCGACTATCCGAATGCCTACGCCGGTTGGGGCCTGCGTGACCTCTGCGACGCG CTGCATGCGTTCAACCAGGAATTTGCCGTGGCCAAGGTGATGCGTGAGATGTATGTGGATCTGCCGACGCCGGTGATGAC CCCGGCCGATGCCTACAACCACCTGGTCAAGGGCGAGATCGAGCGGGTCGACATCGAGCAGATCAGTGGCCGCATTGCGG CGACCATGCTGGTGCCGTACCCGCCGGGCATCCCGACCATCATGCCGGGTGAGCGTTTTGGTGACAGCGACGAGCCGATC ATCCAGTCGCTGCGCATCGCCCGCGAGCAGAATGCGCGTTTCCCGGGCTTCGAGTCGGACGTGCACGGGCTCATCATCGA GCAGGAGGGGGATGCGGTTTCGTACAAGGTGGAGGTGCTGAAGGCCTGA Protein sequence : MYFKSLDYPVIVIDNDYESPRIGGILIRALVEELRSNDQRVLCGLNLDDARAGARTYVAASAVLISIDGSEEVDGEFQRL TAFLREQSARRANLPVFLYGERRTIEKVPSKLLKYIHGFIFLFEDTKSFISRQVMRAAEDYMKNLLPPFFKALIHHAAES NYSWHTPGHAGGVAFTKSPVGRAFHQFYGENTLRSDLSISVPELGSLLDHTGPIKDAENEAARNFGADHTFFVTNGTPTA NKIVWHGTVARGDVVFVDRNCHKSLLHALIMTGAVPVYFTPSRNAHGIIGPISLDQFTPESLQQRIAANPLASQAYKAGS KPRIAVVTNSTYDGLCYNAEKIADEIGSAVDFLHFDEAWYAYAAFHPFYENHYGMAKGKPREQDAIIFTTHSTHKLLAAF SQASMIHVRNSAQRNLDAERFNESFMMHTSTSPHYGVIAACDVASKMMEGDAGRSLVQEMHDEAIAFRRAMLHVRDDLGR DDWWFSVWQPTQVERSLDKGDTPAPLVAKREEWYLQPDAHWHGFENLVDDYVLIDPIKVTLLTPGLAMDGSMGKLGIPAA VLSKFLWGRGITVEKTNLYSVLFLFSMGITKGKWSTLVTELMAFKELYDRNAPLSQALPTLAADYPNAYAGWGLRDLCDA LHAFNQEFAVAKVMREMYVDLPTPVMTPADAYNHLVKGEIERVDIEQISGRIAATMLVPYPPGIPTIMPGERFGDSDEPI IQSLRIAREQNARFPGFESDVHGLIIEQEGDAVSYKVEVLKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 2e-128 | 42 |
