Gene Information

Name : Smal_2172 (Smal_2172)
Accession : YP_002028559.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2435320 - 2435994 bp
Length : 675 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: azo:azo0975 probable two-component response regulatory protein

DNA sequence : 
ATGCGAATCCTGCTGATCGAAGACGATGCCGCCCTGGCCGATGGACTGATCCGCGCCCTGCAGGGTGCCGGCCATCTGTG
CGACCACCTCTCGCGCGGACTGCACGCGCCTGCGGCGCTGGCCAGTGCTCCGTATGACGTGATGGTGCTCGACCTTTCAT
TGCCGGACGTGGATGGCCTCGACCTGCTGTCGCGCCTGCGCAACGATGGCGCCACCTTGCCGGTACTGATCCTGACCGCA
CGCGATGGCGTGGAGGACCGCATCCTCGGCCTCGACCGCGGCGGCGATGACTATCTGGCAAAACCATTCGCGCTGGGCGA
GCTGGAAGCGCGCCTGCGTGCGTTGTCGCGCCGCCGCAGTGACGCACCGGCGCAGAAGCGATTGGGCCGGCTGTGCTTCG
ACAGCATCCGCAACGAAGTGCAGGTGGACGGCCAGCGTATCGAGCTGACCGCGCGCGAGCTGTCGCTGGTCGAAGCGTTG
ATGCAGCACCCCGGCCGCACCGTGACCAAGCAGCGCCTGTTCGATGCGCTTTACAGCTGGGACCACGAGGCCAACCTGTC
GGTGATCGAGGTGCACGTCAGCCGCCTGCGCCGCAAGCTGGAGCAGGCCCACGCCGGCGTCGGCATCCGCATGCTGCGTG
GCCTCGGCTACCGGCTGGAGGTCGTGGGTGACTGA

Protein sequence : 
MRILLIEDDAALADGLIRALQGAGHLCDHLSRGLHAPAALASAPYDVMVLDLSLPDVDGLDLLSRLRNDGATLPVLILTA
RDGVEDRILGLDRGGDDYLAKPFALGELEARLRALSRRRSDAPAQKRLGRLCFDSIRNEVQVDGQRIELTARELSLVEAL
MQHPGRTVTKQRLFDALYSWDHEANLSVIEVHVSRLRRKLEQAHAGVGIRMLRGLGYRLEVVGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_2172 YP_002028559.1 winged helix family two component transcriptional regulator BAC0487 Protein 3e-24 43
Smal_2172 YP_002028559.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 4e-22 43
Smal_2172 YP_002028559.1 winged helix family two component transcriptional regulator BAC0638 Protein 2e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_2172 YP_002028559.1 winged helix family two component transcriptional regulator VFG0473 Protein 2e-32 43