Gene Information

Name : Smal_1981 (Smal_1981)
Accession : YP_002028368.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 2223044 - 2224102 bp
Length : 1059 bp
Strand : +
Note : TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: oan:Oant_3198 arsenical-resistance protein

DNA sequence :
ATGACCACTGACACCTCCCGCCTGTCGTTTCTGGACCGGTACCTGACGCTCTGGATCTTCGCCGCCATGGCGCTCGGCGT
CGGCCTGGGCGCGATGTTCGAAGGCGTGCCCAGCGCGTTGAACAGCCTTTCCGTGGGGTCGACCAACATCCCGATCGCCA
TTGGCCTGATCCTGATGATGTACCCGCCACTGGCCAAGGTGAAGTACGAGGAACTGCCCACCGTCTTTGCCGACAAGCGC
GTGCTGATGCTCTCGCTGCTGCAGAACTGGATCGTGGGCCCGTTCCTGATGTTTGGCCTGGCCGTGCTGTTCCTGCGCGA
CTACCCCGAGTACATGACCGGCCTGATCCTGATCGGCCTGGCGCGCTGCATCGCCATGGTGCTGGTGTGGAACCAGCTGG
CCCGCGGCGACGGCCAGTACGTGGCCGGCCTGGTGGCATTCAACTCGATCTTCCAGATCGCGCTGTTCAGCGTCTACGCG
TGGTTCTTCCTTTCCTGGTTGCCGCCGGTGTTCGGACTGCAGGGCAGCGTCATCGATGTCAGCGTCTGGACCATCGCAGA
GGCGGTTCTGATCTACCTGGGCATCCCGTTCCTGGCCGGTTTCCTCACCAGTCGATGGCTGAAGGCGCGCAAGGGCGTGC
AGTGGTATGAAGAGAAGTTCCTGCCTGCCATCAGCCCGATAACGCTCGCCGCACTACTGTTCACCATCGTGGCGATGTTC
AGCCTGAAAGGCGGTGACGTACTGCGGATTCCCATGGACGCGGTGCGCATCGCGATCCCGCTGACGTTGTACTTCATCAT
CCAGTTCGTCATCAGCTTCTTCATGGGCAAGCTGATCGCCAAGGATTATCCACGCACCACTGCGATCGCGTTCACCGCGG
CAGGCAACAACTTCGAACTGGCCATCGCGGTAGCCATCGCGGCCTTCGGCCTGGCCTCGCCGGTCGCCTTCGCCGCCGTC
ATCGGCCCGCTGGTGGAAGTGCCGGTACTGATCCTGCTGGTCCATGTCGCCCTGCGGCTGGGCAAGCGCTACTTTCCTGC
CGACGCACGGAGCCGCTGA

Protein sequence :
MTTDTSRLSFLDRYLTLWIFAAMALGVGLGAMFEGVPSALNSLSVGSTNIPIAIGLILMMYPPLAKVKYEELPTVFADKR
VLMLSLLQNWIVGPFLMFGLAVLFLRDYPEYMTGLILIGLARCIAMVLVWNQLARGDGQYVAGLVAFNSIFQIALFSVYA
WFFLSWLPPVFGLQGSVIDVSVWTIAEAVLIYLGIPFLAGFLTSRWLKARKGVQWYEEKFLPAISPITLAALLFTIVAMF
SLKGGDVLRIPMDAVRIAIPLTLYFIIQFVISFFMGKLIAKDYPRTTAIAFTAAGNNFELAIAVAIAAFGLASPVAFAAV
IGPLVEVPVLILLVHVALRLGKRYFPADARSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 4e-77 70
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 9e-97 69
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 7e-97 69

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_1981 YP_002028368.1 arsenical-resistance protein BAC0573 Protein 6e-84 61
Smal_1981 YP_002028368.1 arsenical-resistance protein BAC0004 Protein 2e-65 51