|
Name : Smal_1877 (Smal_1877) Accession : YP_002028264.1 Strain : Stenotrophomonas maltophilia R551-3 Genome accession: NC_011071 Putative virulence/resistance : Virulence Product : FliI/YscN family ATPase Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.14 Position : 2114527 - 2115912 bp Length : 1386 bp Strand : - Note : KEGG: xcb:XC_2263 flagellar protein; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase DNA sequence : ATGACCCCCGAAGCGCAACCGAACCTGCCGCCGGCTGACTGGGCCGTGGCCCGCAACCTGCGCCTGGCCCGTCGCCTGGA CGGCCTGCGCGTGGACACCGGGCATGGACGCGGCCTGATCCGCGAGGGCGTGCTGCGCCGGGCAGTCGGTCTGACCCTGG AAGCGGTCGGCTGCGAGGCGCCGCTGGGTGCCAGCTGCAAGGTGGAAGTGGTCGACGGCGGCTGGGTCGATGCCGAAGTG GTCGGCTTCGCCGGCGAGCGCACCTACCTGATGCCCAGCGCCGAGCTGCATGGCCTGCTGCCCAATGCACGGGTGGTGCC GTCGGCGCGCCGTGGCGGCGTGGAAGTGGGCGAAGGCCTGCTCGGCCGCGTCATCGACAGCGATGGCGTGCCGCTGGATG GCAAGGGACCGATCCGCGCCGAAGGCCATGTCGGCATGGCGGGTGTCTCGATCAATCCGCTGGCGCGCGAACCCATTACC CAGCCGCTGGACGTGGGCGTGCGCGCGATCAACGCGCTGCTACCGATCGGCCGTGGCCAGCGTGTCGGCCTGTTCGCCGG CTCCGGCGTCGGCAAGTCGACGCTGCTCGGCATGATGACCCGTTACACCGCCGCCGACGTGATCGTGGTCGGCCTGATCG GTGAGCGTGGCCGCGAAGTACGCGATTTCGTCGAGACCACGCTGGGCGAGGAAGGCCTGCGCCGCGCCGTGGTGGTGGCC AGTCCCGCCGACCGGCCGCCATTGGCGCGACTGCACGGCGCCTACCGCGCTACCGCCATCGCCGAATGGTTCCGCGACCA GGGCCTGAACGTACTGCTGCTGATGGATTCGCTGACCCGCTTCGCGCAGGCGCAGCGCGAGATCGGACTGTCGGTTGGTG AACCGCCGACCACCCGCGGCTACCCGCCTTCGGTGTTCGCCAAGCTGCCGGCGCTGGTCGAACGCGCCGGTAATGGTGCC AAGGGCCGTGGCTCGATCACCGCGTTCTACACCGTGCTGACCGAAGGCGATGATCCGCAGGATCCGATCGCCGATGCGGC GCGCGCGATCCTCGATGGCCACATCCTGCTGTCGCGCCGCGTGGCCGACAGCGGCCTGTATCCGGCCATCGACGTCGAAT CGTCGGTCAGCCGCGTGGTCACGGAAATCGCCGACGAGCCGTGGCGCCTACGCATCCGCAAGTTGAAGCGACTGGTCTCG GCCTATTCGGCCAACCGTGACCTGATCGCCATCGGTGCCTATCAGCGCGGCAACGACGCGGCCACCGACGAAGCCCTGGA ACGCTGGCCGGAAATCATGGAATTCCTCGGCCAGGACGTTGCCAAGGCCGCAGATCTCCCGCACAGCCAGGCGGCGCTGC AGCGCCTGGTGGAACAAGAGAGTTAA Protein sequence : MTPEAQPNLPPADWAVARNLRLARRLDGLRVDTGHGRGLIREGVLRRAVGLTLEAVGCEAPLGASCKVEVVDGGWVDAEV VGFAGERTYLMPSAELHGLLPNARVVPSARRGGVEVGEGLLGRVIDSDGVPLDGKGPIRAEGHVGMAGVSINPLAREPIT QPLDVGVRAINALLPIGRGQRVGLFAGSGVGKSTLLGMMTRYTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVVA SPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGA KGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSRRVADSGLYPAIDVESSVSRVVTEIADEPWRLRIRKLKRLVS AYSANRDLIAIGAYQRGNDAATDEALERWPEIMEFLGQDVAKAADLPHSQAALQRLVEQES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-82 | 50 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-82 | 50 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-84 | 50 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-84 | 50 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 4e-69 | 50 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 3e-69 | 50 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 3e-69 | 50 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 6e-69 | 50 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 6e-69 | 50 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 5e-83 | 49 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 4e-83 | 49 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 2e-84 | 49 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 2e-84 | 49 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-84 | 49 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 6e-80 | 49 |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 4e-76 | 48 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 5e-62 | 45 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 3e-69 | 45 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 2e-63 | 45 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 4e-64 | 45 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 3e-63 | 45 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 4e-63 | 44 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 7e-63 | 44 |
| hrcN | ABQ88354.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-59 | 44 |
| hrpJ4 | AAA81942.1 | HrpJ4 | Virulence | Hrp PAI | Protein | 1e-59 | 44 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 5e-63 | 44 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 4e-63 | 44 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-65 | 43 |
| ysaN | AAS66842.1 | YsaN | Not tested | SSR-1 | Protein | 3e-58 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smal_1877 | YP_002028264.1 | FliI/YscN family ATPase | VFG1254 | Protein | 1e-111 | 60 |
| Smal_1877 | YP_002028264.1 | FliI/YscN family ATPase | VFG2499 | Protein | 2e-107 | 59 |
| Smal_1877 | YP_002028264.1 | FliI/YscN family ATPase | VFG2331 | Protein | 4e-101 | 57 |
| Smal_1877 | YP_002028264.1 | FliI/YscN family ATPase | VFG0192 | Protein | 2e-78 | 51 |
| Smal_1877 | YP_002028264.1 | FliI/YscN family ATPase | VFG0515 | Protein | 2e-69 | 50 |
| Smal_1877 | YP_002028264.1 | FliI/YscN family ATPase | VFG0048 | Protein | 1e-78 | 49 |
| Smal_1877 | YP_002028264.1 | FliI/YscN family ATPase | VFG0390 | Protein | 6e-79 | 48 |
| Smal_1877 | YP_002028264.1 | FliI/YscN family ATPase | VFG2144 | Protein | 1e-76 | 46 |
| Smal_1877 | YP_002028264.1 | FliI/YscN family ATPase | VFG2459 | Protein | 3e-64 | 41 |
| Smal_1877 | YP_002028264.1 | FliI/YscN family ATPase | VFG1008 | Protein | 1e-59 | 41 |
