Gene Information

Name : Smal_1717 (Smal_1717)
Accession : YP_002028104.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Resistance
Product : aminoglycoside phosphotransferase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG3231
EC number : -
Position : 1930418 - 1931221 bp
Length : 804 bp
Strand : +
Note : PFAM: aminoglycoside phosphotransferase; KEGG: ret:RHE_CH02947 putative aminoglycoside 3'-phosphotransferase protein

DNA sequence : 
ATGCAGGCAACACACGCAAGCAGCGACGGCATGCCGTTGCCATCGGCGTGGCGCGAAGCGCTGGCCGGCGCGCGCATCGA
GCGGCAGTCGATCGGGGTTTCGCGTGCGGACGTCGCCCGCGTGCATCGACCGGGGCAGGCCGATGCCTTCCTGAAATCGG
AAGTGATCGATCCCTTCAGTGAGCTGGGCGATGAGATCGCCCGCCTGCGTTGGCTGCAGGCGCAGGGCCAGCCGGTGCCG
ACGGTGATCGCCACCGCCGAGGACGCTGGCCGGCGCTGGTTGCTGATGAGCGCGCTGCCCGGCCGTGACCTGGCGTCCTC
GCCGGAACTCGTCCCGCAGCGGCTGGTGGAGGTGCTGGCCGATGCGTTGCGCGGGCTGCATGCGTTGCCGGTGGCAGCAT
GTCCGTTCGATCAGCGCCTGGCCTCGCGCGTGCAGGCCGCGGTGGCGCGCGCCGAAGCAGGCCTGGTCGATGCCGATGAT
TTCGATGATGAGCGCCTGGGGCAGAGCGCGCAGCAGGTGCTTGCCGAGCTGCTCGCCAGCCAGCCCGCACATGAAGATCT
GGTGGTCAGCCACGGTGATGCCTGCCTGCCCAACCTGATGGTTGCCGAGGGCCGCTTCAGTGGTTTCATCGATTGTGGCC
GGCTGGGTGTGGCCGACCGCTATCAGGACCTTGCGCTGGCCGCGCGCAGCCTTGTCCACAATTTCGGTGATACGCGCTGG
GTCGCGCCGTTGTTCCAACGCTACGGCGCGGTGGCCGACGAGCGCCGGCTGGCGTTCTACCGGTTGCTCGACGAGTTCTT
CTGA

Protein sequence : 
MQATHASSDGMPLPSAWREALAGARIERQSIGVSRADVARVHRPGQADAFLKSEVIDPFSELGDEIARLRWLQAQGQPVP
TVIATAEDAGRRWLLMSALPGRDLASSPELVPQRLVEVLADALRGLHALPVAACPFDQRLASRVQAAVARAEAGLVDADD
FDDERLGQSAQQVLAELLASQPAHEDLVVSHGDACLPNLMVAEGRFSGFIDCGRLGVADRYQDLALAARSLVHNFGDTRW
VAPLFQRYGAVADERRLAFYRLLDEFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aphA1 ADZ05811.1 aminoglycoside (3')-phosphotransferase APH (3')-Ia Not tested AbaR20 Protein 2e-27 43
aph15 ACY75516.1 aminoglycocoside phosphotransferase Not tested Tn6060 Protein 1e-38 41
aphA15 CAD91341.1 aminoglycoside phosphotransferase Not tested Not named Protein 1e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_1717 YP_002028104.1 aminoglycoside phosphotransferase V00618.gene.p01 Protein 3e-56 51
Smal_1717 YP_002028104.1 aminoglycoside phosphotransferase K00432.1.orf2.gene.p Protein 9e-36 46