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Name : Smal_1651 (Smal_1651) Accession : YP_002028039.1 Strain : Stenotrophomonas maltophilia R551-3 Genome accession: NC_011071 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1858714 - 1860627 bp Length : 1914 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: DNA sequence : ATGGCTTCACCCTGGCGGGACAGAATCCTCGGCCTGATGCCGCGTTCGGCCATCGTCTGCCACGACCTCTTCATGGTCTG GGCATGCTGGCAGCTGCTCCATGCGGGGCGCTACTCGATCCTTCCCAACGCGCCCGCGCTTCCCCTGTGGAATGTCGACA CCACCCTGGTACTGCTGCTGCAGGGCCTGGTGTTCTGGCGCGTTGGCCTGTATCGCGGGCTGTGGCGTTTCGCCAGCGTC AGCGACCTGCTGAACATCTTCAAGGCCAGCTTCATCGGCATGGTCGCCATCGTGCTGGTGCTGATGTGGAAGCGCTTCGA TGGCGTGCCGATGTCGGTGCTGGTGATCTATCCGTTCGCGCTGTCGGCGCTGCTGGGCGCGCCGCGGTTGCTGTACCGGG CATGGAAGGACTACCAGTCGCTGCAGTCGGATTCGTCCGCGCGGCGCGTGTTGATCCTGGGTGCCGGCCAGGCCGCTGAG ACCCTGGTCCGCGACCTGCGCCGGTCGGGCAACTTCGAACCGGTGGGCCTGCTGGATGATGCGCCCCACCTGCGCGGGGC CAAGCTGCAGGGCCTGCCCATCCTGGGTGGCCTGGACGACGCGCCGGCAGTAGTGCGCGAAACCGCGGCCAAGCTGCTGG TGATTGCGATGCCCTCGCTTGACGCTGCAGGCATGCAGCGCGTGGTCGCCATCTGTGAAAGCACCGGCGTACCATTCCGC ACCGTGCCAAAGCTCAGCGACATCCTGCAGGGCCAGTCGCTGCCAGGGCAGTTGAAGGAAGTGGCGATCGAGGACCTGCT CGGTCGCAAGCCGATCATGCCGGACTGGAACCTGATCCGCGGCTGGTTGGGCGGGCGTACGGTGATGGTCACCGGTGCCG GTGGCTCGATCGGCTCGGAGCTGTGCCGCCAGTGCGCGCGCCACGGCGCCGGCCGCATCATCCTGCTGGAGATCAGCGAG CTGCTGTTGCTGACCATTGAAGGTGAACTGCGCCGCAGCTTCCCTGATGTCGAGGTCGAAGCGGTACTGGGTGACTGTGG CGACCCGGCGGTGATCCGCCACGCGTTGTCGCTGCATCCGGTCGATACCGCGTTCCACGCCGCTGCCTACAAGCATGTGC CGGTGCTGGAGCGCCAGCTGCGCGAAGCGGTACGCAACAACATCCTGGCCACCGAGAACGTGGCCCGTGCCTGCATGGAG GCACGCGTCGAGCATTTCGTGTTCATCTCCACCGACAAGGCAGTGGACCCGGTCAACGCACTGGGCGCCAGCAAGCGCTA CGCCGAGATGATCTGCCAGAGCCTGGACCAGAAGTCCACGCACACCCGGTTCGTCACCGTGCGCTTCGGCAACGTGCTGG CCTCGGCCGGCAGCGTGGTGCCGTTGTTCCGCGAGCAGATCCTGCGCGGCGGGCCGGTCACCGTCACCGACCCGGAAGTC AGCCGCTACTTCATGACCATTCCGGAGGCCTGCCAGCTGATCCTGCAGGCCGCTGCGTCGGCGTCGCATGGTGCGATCTA CACGCTCGACATGGGCGAGCCGGTGCCGATCCGCGTGCTGGCCGAACAGATGATCCGCCTGGCCGGCAAGCAGCCGTACA AGGACGTCCAGATCATCTACACCGGCCTGCGCCCGGGCGAGAAGCTGCACGAGACGCTGTTCTATTCGGACGAGGACTAT CGTTCGACCGCACACCCGAAGATCCTTGAGGCCGGTGTGCGCACGTTCGCGCGCGATGTGGTGCTGGGCAATGTCCCGCG CCTGCGCGAGGCGGTGTGCAGCTACGACACGACCAGCATCCAGGAGATCCTGTTCGCGACGATGCCGGAGTTCTCTCCCA TCGAACAGGATGCTTACATTTCATCCGCTAAAGTTGTGCCCTTTCCGGCACGTGAGGCCAACAGGCACCAATGA Protein sequence : MASPWRDRILGLMPRSAIVCHDLFMVWACWQLLHAGRYSILPNAPALPLWNVDTTLVLLLQGLVFWRVGLYRGLWRFASV SDLLNIFKASFIGMVAIVLVLMWKRFDGVPMSVLVIYPFALSALLGAPRLLYRAWKDYQSLQSDSSARRVLILGAGQAAE TLVRDLRRSGNFEPVGLLDDAPHLRGAKLQGLPILGGLDDAPAVVRETAAKLLVIAMPSLDAAGMQRVVAICESTGVPFR TVPKLSDILQGQSLPGQLKEVAIEDLLGRKPIMPDWNLIRGWLGGRTVMVTGAGGSIGSELCRQCARHGAGRIILLEISE LLLLTIEGELRRSFPDVEVEAVLGDCGDPAVIRHALSLHPVDTAFHAAAYKHVPVLERQLREAVRNNILATENVARACME ARVEHFVFISTDKAVDPVNALGASKRYAEMICQSLDQKSTHTRFVTVRFGNVLASAGSVVPLFREQILRGGPVTVTDPEV SRYFMTIPEACQLILQAAASASHGAIYTLDMGEPVPIRVLAEQMIRLAGKQPYKDVQIIYTGLRPGEKLHETLFYSDEDY RSTAHPKILEAGVRTFARDVVLGNVPRLREAVCSYDTTSIQEILFATMPEFSPIEQDAYISSAKVVPFPAREANRHQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-75 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smal_1651 | YP_002028039.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 5e-75 | 42 |
