Gene Information

Name : Smal_0109 (Smal_0109)
Accession : YP_002026497.1
Strain : Stenotrophomonas maltophilia R551-3
Genome accession: NC_011071
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 132476 - 133885 bp
Length : 1410 bp
Strand : +
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: xcb:XC_0194 glutamine synthetase

DNA sequence :
ATGTCCGTGGAAAACGTTGAGAAGCTGATCAAGGACAACCAGATCGAGTTCGTCGACCTGCGCTTTGTCGACATGCGTGG
TGTCGAGCAGCACGTGACCTTCCCGGTCAGCATCGTCGAGCCGTCGCTGTTCGAAGAAGGCAAGATGTTCGATGGCAGCT
CGATCGCCGGCTGGAAGGGCATCGCCGAATCGGACATGGTGCTGCTGCCGGATACCGCCAGCGCCTACGTCGACCCGTTC
TACGCCGATCCGACCATCGTGATCAGCTGCGACATCCTCGATCCGGCCACCATGCAGCCGTATGGCCGTTGCCCGCGCGG
CATCGCCAAGCGGGCCGAGGCCTACCTGAAGTCCTCCGGCATCGCCGAAACCGCGTTCTTCGGCCCGGAGCCGGAATTCT
TCATCTTCGATTCGGTCCGCTTCGCCAATGAAATGGGCCACACCTTCTTCCAGGTCGATTCGGAAGAAGCGGCGTGGAAC
AGCGGCGCCAAGTACGACGGCGCCAACAGCGGCTACCGTCCGGGCGTGAAGGGCGGTTACTTCCCGGTGCCGCCGACCGA
CACCCTGCACGACCTGCGCGCCGAGATGTGCAAGACCCTGGAACAGGTCGGCATCGAAGTGGAAGTGCAGCACCACGAAG
TGGCCACCGCCGGCCAGTGCGAGATTGGCACCAAGTTCAGCACCCTGGTGCAGAAGGCCGACGAACTGCTGCGCATGAAG
TACGTGATCAAGAACGTCGCGCACCGCAACGGCAAGACCGTCACCTTCATGCCCAAGCCGATCGTCGGCGACAACGGCAG
CGGCATGCACGTGCACCAGTCGCTGTCCAAGGGCGGCACCAACCTGTTCTCCGGCGACGGCTACGGCGGCCTGAGCCAGC
TGGCGCTGTGGTACATCGGCGGCATCTTCAAGCATGCCAAGGCCATCAATGCCTTCGCCAACTCGGGCACCAACAGCTAC
AAGCGCCTGGTGCCGGGCTACGAAGCACCGGTGATGCTGGCCTACTCGGCCCGCAACCGTTCGGCTTCGTGCCGCATTCC
GTGGGTGTCCAACCCGAAGGCACGCCGCATCGAAATGCGCTTCCCGGATCCGATCCAGTCCGGCTACCTCACCTTCACCG
CGCTGATGATGGCCGGCCTGGACGGCATCAAGAACCAGATCGACCCGGGCGCACCGAGCGACAAGGACCTGTACGACCTG
CCGCCGGAAGAAGAGAAGCTGATCCCGCAGGTCTGCTCCTCGCTGGACCAGGCGCTGGAAGCGCTGGACAAGGACCGTGA
GTTCCTGAAGGCCGGCGGCGTGATGAGCGATGACTTCATCGACGGCTACATCGCGCTGAAGATGCAGGAAGTGACCAAGT
TCCGCGCGGCCACCCACCCGCTGGAATATCAGCTGTACTACGCCAGCTGA

Protein sequence :
MSVENVEKLIKDNQIEFVDLRFVDMRGVEQHVTFPVSIVEPSLFEEGKMFDGSSIAGWKGIAESDMVLLPDTASAYVDPF
YADPTIVISCDILDPATMQPYGRCPRGIAKRAEAYLKSSGIAETAFFGPEPEFFIFDSVRFANEMGHTFFQVDSEEAAWN
SGAKYDGANSGYRPGVKGGYFPVPPTDTLHDLRAEMCKTLEQVGIEVEVQHHEVATAGQCEIGTKFSTLVQKADELLRMK
YVIKNVAHRNGKTVTFMPKPIVGDNGSGMHVHQSLSKGGTNLFSGDGYGGLSQLALWYIGGIFKHAKAINAFANSGTNSY
KRLVPGYEAPVMLAYSARNRSASCRIPWVSNPKARRIEMRFPDPIQSGYLTFTALMMAGLDGIKNQIDPGAPSDKDLYDL
PPEEEKLIPQVCSSLDQALEALDKDREFLKAGGVMSDDFIDGYIALKMQEVTKFRAATHPLEYQLYYAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-111 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smal_0109 YP_002026497.1 glutamine synthetase VFG1399 Protein 2e-109 52