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Name : Ppha_0931 (Ppha_0931) Accession : YP_002017835.1 Strain : Pelodictyon phaeoclathratiforme BU-1 Genome accession: NC_011060 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 968034 - 969329 bp Length : 1296 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATATCAACACTATCCGTCAGCATCCCGAAGAAATCATTTCCATGCTGCACAACCGCCAGCTTGCTTCTGAAGA ACCAAAAATTGAACAGCTTCTTAACCTCGACAGGGAGCGCAAAGGGTTGGTTCAGCGTTCGGACGATCTGAAAGCACTGC GCAACAAAGTTTCAAAAGAGATCGCAGAGATAAAAAAAAGTGGTATTGGCTCATCCGGCGAACTTATCCTCCAGATGAAA TCAGTATCGGAAGAAATTGCCGGAATGGATACCTCGCTTGGCCATCTTGAAGAGGAGATTGAAACCATTCTTCTGGGCCT CCCCAACAAGCTGCATCCATCCGTTCCTGTCGGACGTTCTGCTGACGACAACCAGATCTTCAAGGAGCCGATATCTTTTC CCTACCATCTTGACTTTCCGCTCAAGAACCATCTTGAACTGGGCAAATCCCTTCGGATTCTTGATTTTGAACGGGGCGCA AAAGTTTGCGGAGCGGGATTTCCTGTCTATATCGGCAAAGGGGCTCGACTTGAACGTGCACTGATCAATTTCATGCTCGA CTGCCATACCGAACGTCACGGCTATACAGAGGTCTTTCCGCCCTTTTTCGTCAATCAGGAGTCGCTCAGAGGAACCGGGC AGTGGCCAAAATTTGCCGATCAGGTTTACCACATGGAGGAGGATGATCTTTACGCCATACCAACAGCCGAGGTACCGATA ACCAACCTGCACCGGGGAGAGATGCTGGATACAAAAACGCTCCCAATCTCCTATGCAGCCTATTCAGCCTGTTTCCGTCG CGAAGCGGGAAGTTACGGCAAAGATACCAGAGGATTCCTCAGGGTGCACCAGTTCAACAAGGTGGAAATGGTAAAGTTCA CCCGACCGGAAGAGTCGTATGAGGCGCTTGAAACGATTCGAGAAAACGCTGAAGCAATTCTCACTGCGCTCAAAATCCCC TACCGGGTACTTTTACTCTGCAGCGGCGATATCAGCGCCAATGCAACGAAATGTTATGATATCGAGGTCTGGTCACCAGC CGAGCAGAAATATCTTGAAGCATCAAGCTGTTCAAACTTTGAAGATTACCAGGCCCGGCGCGCCAACATCCGTTTCAAGT CGGAGAGTAATGCAAAACCGGAGTTCGTCCACACCCTGAATGGCTCAGGCCTGGCAACCTCCCGCCTTATGGTCTCCCTG CTTGAGCACTACCAGACTGCGGAAGGCTCCATCATGGTGCCGGAGGTATTGCGGCACTATACCAGGTTTGACGAGATTAC TCAGGCTGCTGAGTGA Protein sequence : MLDINTIRQHPEEIISMLHNRQLASEEPKIEQLLNLDRERKGLVQRSDDLKALRNKVSKEIAEIKKSGIGSSGELILQMK SVSEEIAGMDTSLGHLEEEIETILLGLPNKLHPSVPVGRSADDNQIFKEPISFPYHLDFPLKNHLELGKSLRILDFERGA KVCGAGFPVYIGKGARLERALINFMLDCHTERHGYTEVFPPFFVNQESLRGTGQWPKFADQVYHMEEDDLYAIPTAEVPI TNLHRGEMLDTKTLPISYAAYSACFRREAGSYGKDTRGFLRVHQFNKVEMVKFTRPEESYEALETIRENAEAILTALKIP YRVLLLCSGDISANATKCYDIEVWSPAEQKYLEASSCSNFEDYQARRANIRFKSESNAKPEFVHTLNGSGLATSRLMVSL LEHYQTAEGSIMVPEVLRHYTRFDEITQAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-87 | 48 |
