Gene Information

Name : Ppha_0875 (Ppha_0875)
Accession : YP_002017780.1
Strain : Pelodictyon phaeoclathratiforme BU-1
Genome accession: NC_011060
Putative virulence/resistance : Unknown
Product : lysozyme
Function : -
COG functional category : R : General function prediction only
COG ID : COG3772
EC number : 3.2.1.17
Position : 913198 - 913629 bp
Length : 432 bp
Strand : +
Note : PFAM: glycoside hydrolase family 24; KEGG: cch:Cag_0702 probable phage-related lysozyme

DNA sequence :
ATGATGCAGACAAGTGAAAACGGGTTTGCTCTTATTCGAAAGTATGAGGGTTTGCGTCTTGCGACGTATGTCTGTCCGGG
GGGAAAGCTGACGATCGGGTATGGCCATACGGGCCCGGATGTTACAACGGGGAAAAAAATTGATGAAGAGGAGGCAAATG
CACTTCTGGTCAAGGATGTTCAGCGTTTTGAGCGTGCAGTTAACGGGCTGGTGACGGCGCCGATGACGCAGGGGATGTTC
GATGCGCTGATCAGTTTTTCCTTTAATCTTGGCGTCGGCTCATTGAAAAGTTCGACCTTGCTGAAAAAACTGAATGCCGG
TAATCTGACTGGTGCGGCGGATGAGTTTTTGAAGTGGAACAAGGCGGGTGGGAAGGTGCTGGCGGGCCTCTCTGCGCGGC
GCGAGAGTGAGCGGGAGCGCTTTTTGGTTTGA

Protein sequence :
MMQTSENGFALIRKYEGLRLATYVCPGGKLTIGYGHTGPDVTTGKKIDEEEANALLVKDVQRFERAVNGLVTAPMTQGMF
DALISFSFNLGVGSLKSSTLLKKLNAGNLTGAADEFLKWNKAGGKVLAGLSARRESERERFLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03062 YP_001439127.1 hypothetical protein Not tested Not named Protein 7e-13 46
nucD2 NP_458702.1 putative lysozyme Not tested SPI-7 Protein 1e-15 41
nucD NP_807909.1 lysozyme Not tested SPI-7 Protein 1e-15 41