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Name : Ppha_0623 (Ppha_0623) Accession : YP_002017540.1 Strain : Pelodictyon phaeoclathratiforme BU-1 Genome accession: NC_011060 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 596939 - 598237 bp Length : 1299 bp Strand : + Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: cte:CT0227 UDP-glucose/GDP-mannose dehydrogenase family protein DNA sequence : ATGAATTCAATTAGAATTGCTGTTGTTGGTCTTGGCTATGTCGGCTTGCCGCTTGCTGTGGAGTTTGCCAAAAAGTATCC TGTCGTTGGTTTTGATATCAAGCAGGAGCGTGTCGGTGAACTTGGGCAAGGTTACGATGCTACACTTGAGGTGACCAGTG AAGAGCTGAAGAGTGTTCTCTGCGAGAGTAACTATAATGGGGAGGAAGGGAGTCCGGGTCTTTTTGTGAGTTCTGACAGT AGCGATCTTGGTGCGGTAAATTACTATATCGTTACGGTACCTACTCCGACTGACAAGAACAATCGTCCTGATCTTTCACC GCTCCTCAAGGCGAGCGAAACCATTGGCAGGGTGCTCAAGATGGGCGATATTGTCATCTATGAATCAACGGTCTATCCCG GTGCTACCGAGGAGGATTGTGTCCCTGTTCTTGAACGATTCTCCGGGCTTACGTTCAACCGTGACTTTTTTGCTGGCTAC TCTCCCGAACGGATTAATCCCGGCGATAAGGAGCATACAGTAACAAAGATAAAAAAGGTTACATCGGGCTCAACTCCAGA TATTGCCACTAAAGTTGATTCGCTCTATCGATCGATCATCGTTGCCGGTACCCACTTGGCCTCATCCATCAGGGTTGCGG AGGCGGCCAAGGTGATTGAGAATTCGCAGCGTGATATCAATATTGCCTTTGTCAATGAGTTGTCCGTGATTTTCAACCGG ATGGGGATCGACACTCATGAAGTTCTGGCGGCAGCGGGTACCAAATGGAACTTTCTTCCCTTTAAACCGGGTCTTGTGGG AGGTCACTGCATCGGTGTTGATCCATATTATCTTGCCCAGAAGGCTCAGGAGTATGGCTACCATCCGGAAATCATTCTTG CGGGGCGGAGGTTGAACGATAACATGGGCAAGTATATAGCCTCGCAGGTCATTAAACTGATGATAGCGCGTGATCACAAG ATCAAGGGTGCCAAGATTCTGATGCTTGGCATCACCTTTAAGGAGAACTGTCCCGATATCCGGAACACCCGTGCTGTCGA TATTGTGAATGAACTGAAGCAGTATGGCGCTGAAGTGGATATTCACGATCCGTGGGCGAATCCCGAAGAGGTGATGCATG AATACGGGTTTGAATGCCTTCATGAGCTTAATGGCAATCATTACGAGGCCATCATTCTTGCTGTAGCGCACGATGCATTT GCCGCTCTTGATATTCGCTCACTTAGCTCTGGCATTAATGCGGTCATTTATGATGTGAAAGGGGTTTTGCCGATTGATAA GGTTAGTGGAAGGTTGTAA Protein sequence : MNSIRIAVVGLGYVGLPLAVEFAKKYPVVGFDIKQERVGELGQGYDATLEVTSEELKSVLCESNYNGEEGSPGLFVSSDS SDLGAVNYYIVTVPTPTDKNNRPDLSPLLKASETIGRVLKMGDIVIYESTVYPGATEEDCVPVLERFSGLTFNRDFFAGY SPERINPGDKEHTVTKIKKVTSGSTPDIATKVDSLYRSIIVAGTHLASSIRVAEAAKVIENSQRDINIAFVNELSVIFNR MGIDTHEVLAAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDNMGKYIASQVIKLMIARDHK IKGAKILMLGITFKENCPDIRNTRAVDIVNELKQYGAEVDIHDPWANPEEVMHEYGFECLHELNGNHYEAIILAVAHDAF AALDIRSLSSGINAVIYDVKGVLPIDKVSGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-120 | 58 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-120 | 58 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-108 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ppha_0623 | YP_002017540.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 3e-120 | 58 |
