Gene Information

Name : Ppha_0436 (Ppha_0436)
Accession : YP_002017379.1
Strain : Pelodictyon phaeoclathratiforme BU-1
Genome accession: NC_011060
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 421183 - 422163 bp
Length : 981 bp
Strand : -
Note : KEGG: cch:Cag_0467 KpsF/GutQ; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)

DNA sequence :
ATGAGCATACCATCCCAAAAACAGGAAATTACAGCGCTTGGAAAAATAATTCTTGATCAGGAAGCCCGCGCCATTCATTT
GATAGCCGAACGACTTGATGAGAGTTTTTCGGCTGCCGTGGAACTTCTTGCATCATGCCAGGGAAAAATCATCATCTCCG
GTATGGGGAAATCAGGTATCATTGCACAAAAAATAGCCGCAACGATGTCATCAACTGGTTCAACAGCCCTTTTTCTTCAT
CCGGCAGATGCCGCTCATGGAGATCTTGGGATTGTCGGTCATACCGATACCGTCATCTGTCTTTCGAAAAGCGGCACAAC
CGAGGAGCTGAACTTTATCATCCCGGCACTCCGCCAGATTGGTGCAAAAATTATTGCGATGACTGGCAATCCCCGCTCTT
TTCTTGCCCAGAAAGCGGATATCACACTTGATACCGGCATAGCAAAAGAGGCTTGTCCGTATGATCTGGCACCGACAACC
TCGACAACGGCTATGCTCGCCATGGGAGATGCCCTTGCCATTGCGTTGATGCAGGTGAAAAATTTCACACAAAGAGATTT
TGCGCTGACCCATCCCAAAGGATCACTCGGACGACGGTTGACTGTAAAAGTAAGTGACATCATGGCAAAAGGCGATGCTG
TCCCTATCGTGTCAGAGAGTGCTTCGGTGACCGGTCTTATCCTTGAAATGACATCGAAGCGATATGGAGTAAGCGCTGTT
ATAACTGATGATGGTAAGCTGTGCGGCATTTTTACCGATGGTGACCTTCGTCGCCTGGTGCAGAGTGGCAGGGAGTTCCT
CAACCTCAGCGCGGGTTCAGTTATGACTGCAAATCCCAAGACTGTCACAGGCGACACCATGGCTAAAGAGTGTCTTGACA
TTCTTGAAACCTGGCGCATTACACAGTTGCTGGTGTGCGACGATGAACAGCATCCTGTTGGAATGGTGCATATTCATGAT
TTAATTGTACTGGGGTTATAG

Protein sequence :
MSIPSQKQEITALGKIILDQEARAIHLIAERLDESFSAAVELLASCQGKIIISGMGKSGIIAQKIAATMSSTGSTALFLH
PADAAHGDLGIVGHTDTVICLSKSGTTEELNFIIPALRQIGAKIIAMTGNPRSFLAQKADITLDTGIAKEACPYDLAPTT
STTAMLAMGDALAIALMQVKNFTQRDFALTHPKGSLGRRLTVKVSDIMAKGDAVPIVSESASVTGLILEMTSKRYGVSAV
ITDDGKLCGIFTDGDLRRLVQSGREFLNLSAGSVMTANPKTVTGDTMAKECLDILETWRITQLLVCDDEQHPVGMVHIHD
LIVLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 3e-43 42
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 5e-43 42
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-43 41