|
Name : Ppha_0416 (Ppha_0416) Accession : YP_002017360.1 Strain : Pelodictyon phaeoclathratiforme BU-1 Genome accession: NC_011060 Putative virulence/resistance : Virulence Product : RNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : 2.7.7.49 Position : 398658 - 399899 bp Length : 1242 bp Strand : - Note : PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pvi:Cvib_0153 RNA-directed DNA polymerase DNA sequence : ATGACAAAGCCATATGAAATTTCCAAAGAACTTGTCTTGAAAGCGTATCAACAAGTGAAATCTAATGGAGGTGCAGCCGG TGTAGACCGAGAATCGTTACAGGCATTTGAAACAAAACTGAAAGACAACCTGTACAAGGTATGGAACAGGCTCAGTTCCG GCAGTTATTTTCCGCCGCCGGTAAGGGGTGTGGGCATTCCGAAGAAATCTGGAGGAGTGCGTATGCTTGGTGTTCCAACC GTGGCGGACAGGGTAGCTCAAAGCGTTGTAAAAATGGTGCTTGAGCCCATATTGGAACCAGTTTTTCATGAAGATTCGTA TGGTTATCGTCCGGGGCGTTCAGCTCATGACGCTATAGCTGTAGTGAGGAAGAGAAATTGGGAATATGATTGGGTTGTAG AATTCGACATCAAGGGGCTGTTTGATAACATCGATCATGAGTTGTTAATGCGCGCTCTTCGGAAACATTGCCAAACTCCT TGGGTTTTTCTTTACGTAGAGCGGTGGCTAAAGGCACCGATGGAGACCCCGGAAGGTGAGCTGATAGAACGGACAAAAGG AACGCCCCAAGGGGGAGTGGTGAGTCCACTGTTGGCGAACCTGTTTCTGCACTATGCGTTTGACCGGTGGGTGAGCGAAA ATCTACCCGGTGTGCCGTTTTGTCGGTACTCCGATGATGGCGTTCTTCACTGTAAAAGCAAGATACAGGCAGAGCTGGTA AAGCGAAAGATTGGTGAGCGTTTTCGTGAGTGCGGATTAGAGTTACACCCTGATAAGACGCAAATAGTGTATTGCAGGGA TAGCAATCGCAAGGACGAGCATCCAGTAAATCAGTTTACATTTCTTGGTTTTACCTTCTGTTCACGGGAAGCCAAGAAGA AAGATGGAACTTACTTTATTGGGTTTCTGCCGGGAGTAAGCCGGGATGCACTGCGACACATGCGGCAGACGATCAGAAGG TGGAAGCTACAGCTCAAAAACAGCTTGGAACTTGCGGATTTATCAGCACAGTTCAACCCGATACTGAGGGGATGGAAGAA CTACTACACGCGATTTTACGGTTCAGCAATGGCTCCGGTTTGGCAACACATGAACTATTACTTGGCACACTGGATGATGA GAAAGTACAAGCAATTGAGTGGGCACAAAACCAGAGCAAGCAGAAAACTGCGACTTCTGGCGGAAGAGAATCCAAACTTA TTTGCGCATTGGAAAGCGGGGTATACCTCGATGGCTAGATGA Protein sequence : MTKPYEISKELVLKAYQQVKSNGGAAGVDRESLQAFETKLKDNLYKVWNRLSSGSYFPPPVRGVGIPKKSGGVRMLGVPT VADRVAQSVVKMVLEPILEPVFHEDSYGYRPGRSAHDAIAVVRKRNWEYDWVVEFDIKGLFDNIDHELLMRALRKHCQTP WVFLYVERWLKAPMETPEGELIERTKGTPQGGVVSPLLANLFLHYAFDRWVSENLPGVPFCRYSDDGVLHCKSKIQAELV KRKIGERFRECGLELHPDKTQIVYCRDSNRKDEHPVNQFTFLGFTFCSREAKKKDGTYFIGFLPGVSRDALRHMRQTIRR WKLQLKNSLELADLSAQFNPILRGWKNYYTRFYGSAMAPVWQHMNYYLAHWMMRKYKQLSGHKTRASRKLRLLAEENPNL FAHWKAGYTSMAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 8e-118 | 55 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 7e-91 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ppha_0416 | YP_002017360.1 | RNA-directed DNA polymerase | VFG1512 | Protein | 4e-91 | 47 |
